RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 RND2P52198 227 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 ATP5IP56385 69 aaPredicted RBP7.48□□□□□ -1.21
CDH1-206ENST00000564676 RAB11AP62491 216 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 TIGITQ495A1 244 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 PRSS54Q6PEW0 395 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 SLC16A13Q7RTY0 426 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 TMEM116Q8NCL8 245 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 OR52B4Q8NGK2 314 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 TMEM170AQ8WVE7 144 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 CIB3Q96Q77 187 aaPredicted RBP7.48□□□□□ -1.21
CDH1-206ENST00000564676 MAGT1Q9H0U3 335 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 NUDT15Q9NV35 164 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 SMPXQ9UHP9 88 aa7.48□□□□□ -1.21
CDH1-206ENST00000564676 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDH1-206ENST00000564676 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 WRBO00258 174 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 SYNGR2O43760 224 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 H2AFB2P0C5Z0 115 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 BMI1P35226 326 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 RPP30P78346 268 aaKnown RBP7.47□□□□□ -1.21
CDH1-206ENST00000564676 SBSPONQ8IVN8 264 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 OR1S2Q8NGQ3 325 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 NPIPB3Q92617 1050 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 ACY3Q96HD9 319 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 ZNF414Q96IQ9 312 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 OR10C1Q96KK4 312 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 RHPN1-AS1Q9BWJ2 59 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
CDH1-206ENST00000564676 IGHV3OR16-13A0A075B7E8 117 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 IGHV3-74A0A0B4J1X5 117 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 MPTX1A8MV57 137 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 A8MZ25 164 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 OR11H12B2RN74 326 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 CHEK1O14757 476 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 TSPAN4O14817 238 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 UPK1BO75841 260 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 IGKV1-17P01599 117 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 OR10J1P30954 320 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 GPX4P36969 197 aaPredicted RBP7.46□□□□□ -1.22
CDH1-206ENST00000564676 NKX2-1P43699 371 aaPredicted RBP7.46□□□□□ -1.22
CDH1-206ENST00000564676 ASAH1Q13510 395 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 DEFB125Q8N687 156 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 Q8WTZ3 238 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 MITD1Q8WV92 249 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 SLC35E1Q96K37 410 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 METTL26Q96S19 204 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 RNF2Q99496 336 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 SPAG8Q99932 426 aaPredicted RBP7.46□□□□□ -1.22
CDH1-206ENST00000564676 GSKIPQ9P0R6 139 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 TBC1D24Q9ULP9 559 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 U3KQK5 164 aa7.46□□□□□ -1.22
CDH1-206ENST00000564676 IGKV3-7A0A075B6H7 116 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 IGHV3-66A0A0C4DH42 116 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 SCGB1D2O95969 90 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 IGLC1P0CG04 106 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 NPPCP23582 126 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 POLR2GP62487 172 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDH1-206ENST00000564676 ID3Q02535 119 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 IAH1Q2TAA2 248 aaPredicted RBP7.45□□□□□ -1.22
CDH1-206ENST00000564676 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 ENKURQ8TC29 256 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 ZNF431Q8TF32 576 aaPredicted RBP7.45□□□□□ -1.22
CDH1-206ENST00000564676 NARS2Q96I59 477 aaKnown RBP7.45□□□□□ -1.22
CDH1-206ENST00000564676 SEC22CQ9BRL7 303 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 TMEM231Q9H6L2 316 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 ZMAT4Q9H898 229 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 SRD5A3Q9H8P0 318 aa7.45□□□□□ -1.22
CDH1-206ENST00000564676 A0A1W2PS18 150 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 OR4C46A6NHA9 309 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 ZFP92A6NM28 416 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 FAM25EA8MYX2 175 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 H3BP45 60 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 APOHP02749 345 aaPredicted RBP7.44□□□□□ -1.22
CDH1-206ENST00000564676 RD3LP0DJH9 198 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 TFPI2P48307 235 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 YPEL3P61236 119 aaPredicted RBP7.44□□□□□ -1.22
CDH1-206ENST00000564676 RPL11P62913 178 aaKnown RBP7.44□□□□□ -1.22
CDH1-206ENST00000564676 PAFAH1B2P68402 229 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 TCF24Q7RTU0 167 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 C12orf45Q8N5I9 185 aaPredicted RBP7.44□□□□□ -1.22
CDH1-206ENST00000564676 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 ST8SIA2Q92186 375 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 PSENENQ9NZ42 101 aa7.44□□□□□ -1.22
CDH1-206ENST00000564676 STRAPQ9Y3F4 350 aaKnown RBP7.44□□□□□ -1.22
CDH1-206ENST00000564676 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
CDH1-206ENST00000564676 C5orf51A6NDU8 294 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 CCSO14618 274 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 SSSCA1O60232 199 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 DFFBO76075 338 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 TOMM40O96008 361 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 CD5P06127 495 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 IFITM3Q01628 133 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 GAMTQ14353 236 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 HAGHQ16775 308 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 WFDC3Q8IUB2 231 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 GBGT1Q8N5D6 347 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 ZBTB8BQ8NAP8 495 aaPredicted RBP7.43□□□□□ -1.22
CDH1-206ENST00000564676 GRAMD2BQ96HH9 432 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms