RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ATP5IP56385 69 aaPredicted RBP13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 PAFAH1B2P68402 229 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 TCF24Q7RTU0 167 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 ST8SIA2Q92186 375 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 CITED4Q96RK1 184 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 METTL26Q96S19 204 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 TMEM231Q9H6L2 316 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 FLVCR2Q9UPI3 526 aa13.68□□□□□ -0.22
SYNGR3-204ENST00000564642 A0A1W2PS18 150 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 C9orf170A2RU37 121 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 C3orf84H3BNL1 204 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 IGKV1-17P01599 117 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 APOHP02749 345 aaPredicted RBP13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 OR10J1P30954 320 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 TFPI2P48307 235 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 CMC4P56277 68 aaPredicted RBP13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 Q8WTZ3 238 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 NARS2Q96I59 477 aaKnown RBP13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 GGTLC1Q9BX51 225 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 VSIRQ9H7M9 311 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 RETNQ9HD89 108 aa13.67□□□□□ -0.22
SYNGR3-204ENST00000564642 IGHV3-66A0A0C4DH42 116 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 OR4E1P0C645 316 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 IGLC1P0CG04 106 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 YPEL3P61236 119 aaPredicted RBP13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 RPL11P62913 178 aaKnown RBP13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 CNPY1Q3B7I2 92 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 GGNBP1Q5YKI7 109 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 FAM90A2PQ658T7 463 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 GBGT1Q8N5D6 347 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 COQ8AQ8NI60 647 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
SYNGR3-204ENST00000564642 DNASE2O00115 360 aaPredicted RBP13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 DFFBO76075 338 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 IAPPP10997 89 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 BTCP35070 178 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 RAB11AP62491 216 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 ODF3L2Q3SX64 289 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 C4orf46Q504U0 113 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 CIB3Q96Q77 187 aaPredicted RBP13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 PAIP2BQ9ULR5 123 aaKnown RBP13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 STAB2Q8WWQ8 2551 aa13.65□□□□□ -0.22
SYNGR3-204ENST00000564642 SYNGR2O43760 224 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 IFNA21P01568 189 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 ANXA7P20073 488 aaKnown RBP13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 CRYBB3P26998 211 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 RPP30P78346 268 aaKnown RBP13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 DHRS2Q13268 280 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 LYG2Q86SG7 212 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 WFDC3Q8IUB2 231 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 LILRB2Q8N423 598 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 GRAMD2BQ96HH9 432 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
SYNGR3-204ENST00000564642 LYRM1O43325 122 aa13.63□□□□□ -0.23
SYNGR3-204ENST00000564642 ADAP1O75689 374 aa13.63□□□□□ -0.23
SYNGR3-204ENST00000564642 RD3LP0DJH9 198 aa13.63□□□□□ -0.23
SYNGR3-204ENST00000564642 APOC4P55056 127 aa13.63□□□□□ -0.23
SYNGR3-204ENST00000564642 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
SYNGR3-204ENST00000564642 EDA2RQ9HAV5 297 aa13.63□□□□□ -0.23
SYNGR3-204ENST00000564642 WRBO00258 174 aa13.62□□□□□ -0.23
SYNGR3-204ENST00000564642 PLA2G10O15496 165 aa13.62□□□□□ -0.23
SYNGR3-204ENST00000564642 LYL1P12980 280 aa13.62□□□□□ -0.23
SYNGR3-204ENST00000564642 APRG1Q8IVJ8 170 aa13.62□□□□□ -0.23
SYNGR3-204ENST00000564642 MS4A6AQ9H2W1 248 aa13.62□□□□□ -0.23
SYNGR3-204ENST00000564642 ZFP92A6NM28 416 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 TOMM40O96008 361 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 IL4P05112 153 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 HNRNPCP07910 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 P2RY1P47900 373 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 GAMTQ14353 236 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 CCDC32Q9BV29 185 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
SYNGR3-204ENST00000564642 HUWE1Q7Z6Z7 4374 aaKnown RBP13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 TRAV2A0A0B4J234 112 aa13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 RPL35AP18077 110 aaKnown RBP13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 EIF2B2P49770 351 aaKnown RBP13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 SPANXN5Q5MJ07 72 aa13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 C20orf85Q9H1P6 137 aa13.6□□□□□ -0.23
SYNGR3-204ENST00000564642 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 UBE2CO00762 179 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 TCRBP04435 133 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 FABP1P07148 127 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 PSG1P11464 419 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 NKX2-1P43699 371 aaPredicted RBP13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 ID3Q02535 119 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 USF2Q15853 346 aaPredicted RBP13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 CASC10Q5T4H9 136 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 STPG3Q8N7X2 389 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 STXBP6Q8NFX7 210 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 OR51G1Q8NGK1 321 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 MAP6D1Q9H9H5 199 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 U3KQE9 123 aa13.59□□□□□ -0.23
SYNGR3-204ENST00000564642 KIR2DL5BA0A0G2JN68 375 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms