RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HIVEP2P31629 2446 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 PIK3C2GO75747 1445 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 CD109Q6YHK3 1445 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 DOCK5Q9H7D0 1870 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 MAGI1Q96QZ7 1491 aaPredicted RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 TRAV36DV7A0A075B6V5 113 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A087WX48 190 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 A0A1B0GX51 115 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 C11orf86A6NJI1 115 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 C9JCJ5 164 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 LST1O00453 97 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 PLA2G10O15496 165 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 ZNF73O43830 326 aaPredicted RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 SNAPC5O75971 98 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 SERPINE1P05121 402 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 UCHL1P09936 223 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 GZMBP10144 247 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 HIST1H1BP16401 226 aaKnown RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 G6PCP35575 357 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 RUNX1Q01196 453 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 HIST1H1AQ02539 215 aaPredicted RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 PLCXD2Q0VAA5 305 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 LGALS9BQ3B8N2 356 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 PABPC1L2AQ5JQF8 200 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 C6orf52Q5T4I8 152 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 LYRM7Q5U5X0 104 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 LGALS9CQ6DKI2 356 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 GTF2H5Q6ZYL4 71 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 C20orf196Q8IYI0 205 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 TCTE3Q8IZS6 198 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 OR8I2Q8N0Y5 310 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 C9orf62Q8N4C0 152 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 DEFB125Q8N687 156 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 OR52L1Q8NGH7 329 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 THEM6Q8WUY1 208 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 AP1S3Q96PC3 154 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 MIEN1Q9BRT3 115 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 GINS4Q9BRT9 223 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 ZNF471Q9BX82 626 aaPredicted RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 RNASE7Q9H1E1 156 aaKnown RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 UQCC1Q9NVA1 299 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 C14orf105Q9NVL8 296 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 TXNL4BQ9NX01 149 aaKnown RBP1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 LAMTOR3Q9UHA4 124 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 NAT8BQ9UHF3 227 aa1.59□□□□□ -2.15
SHCBP1-202ENST00000563219 NALCNQ8IZF0 1738 aa1.59□□□□□ -2.16
SHCBP1-202ENST00000563219 SIPA1L1O43166 1804 aa1.59□□□□□ -2.16
SHCBP1-202ENST00000563219 RALGAPA2Q2PPJ7 1873 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 PLXNB1O43157 2135 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 NAIPQ13075 1403 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 MIA2Q96PC5 1412 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 RRBP1Q9P2E9 1410 aaKnown RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 GRIN2BQ13224 1484 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 TRAV38-1A0A0B4J264 116 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 DUXBA0A1W2PPF3 345 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 RIIAD1A6NNX1 92 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 C17orf51A8MQB3 221 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 A8MUN3 132 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 FABP5P3A8MUU1 101 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 FNDC10F2Z333 226 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 H3BQF6 201 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 UBFD1O14562 309 aaKnown RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 PIAS1O75925 651 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 OR2H2O95918 312 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF705DP0CH99 300 aaPredicted RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 SMIM17P0DL12 118 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 DEFA4P12838 97 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 CYBAP13498 195 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 RPL7P18124 248 aaKnown RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 BLVRBP30043 206 aaPredicted RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 GUCA1AP43080 201 aaPredicted RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 GNG4P50150 75 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF140P52738 457 aaPredicted RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 TNFAIP6P98066 277 aaPredicted RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 HOXC5Q00444 222 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 SNX29P2Q8IUI4 249 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 C1orf158Q8N1D5 194 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM86AQ8N2M4 240 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 ANKRD29Q8N6D5 301 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM229BQ8NBD8 167 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF418Q8TF45 676 aaPredicted RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 CT55Q8WUE5 264 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 LYSMD1Q96S90 227 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 OR2H1Q9GZK4 316 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 OR2J1Q9GZK6 312 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 COMMD5Q9GZQ3 224 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 PBOV1Q9GZY1 135 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 MRPL27Q9P0M9 148 aaKnown RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 METTL1Q9UBP6 276 aaKnown RBP1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 TNFSF18Q9UNG2 199 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 ITGB4P16144 1822 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 LTBP2Q14767 1821 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 RTL1A6NKG5 1358 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 MED23Q9ULK4 1368 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 MYH10P35580 1976 aa1.58□□□□□ -2.16
SHCBP1-202ENST00000563219 CLIP1P30622 1438 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 NYNRINQ9P2P1 1898 aaKnown RBP1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 hCG_1818297A0A087WSY0 165 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A087WUU8 490 aa1.57□□□□□ -2.16
SHCBP1-202ENST00000563219 TRAV5A0A0B4J249 113 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms