RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CD24P25063 80 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 ELLP55199 621 aaPredicted RBP5.17□□□□□ -1.58
CAPN3-210ENST00000561817 ERHP84090 104 aaKnown RBP5.17□□□□□ -1.58
CAPN3-210ENST00000561817 AKR1C1Q04828 323 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 TNXAQ16473 311 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 GUK1Q16774 197 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 CLEC12BQ2HXU8 276 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 TMEM249Q2WGJ8 235 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 GCSAMLQ5JQS6 135 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 FFAR4Q5NUL3 377 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 ASPHD1Q5U4P2 390 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 TMEM88Q6PEY1 159 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 C19orf35Q6ZS72 473 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 TMEM144Q7Z5S9 345 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 LRRC75A-AS1Q8N1F1 130 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 THAP8Q8NA92 274 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 MAPK1IP1LQ8NDC0 245 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 LFNGQ8NES3 379 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 WFDC11Q8NEX6 87 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 OR2T10Q8NGZ9 312 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 PIFOQ8TCI5 191 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 RNASEH2CQ8TDP1 164 aaKnown RBP5.17□□□□□ -1.58
CAPN3-210ENST00000561817 CACNG8Q8WXS5 425 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 MBD6Q96DN6 1003 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 CTDSP1Q9GZU7 261 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 TMEM231Q9H6L2 316 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 LPAR2Q9HBW0 351 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 AP5S1Q9NUS5 200 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 KIAA1456Q9P272 454 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 PEF1Q9UBV8 284 aaKnown RBP5.17□□□□□ -1.58
CAPN3-210ENST00000561817 SVEP1Q4LDE5 3571 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 NAV2Q8IVL1 2488 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 CSMD2Q7Z408 3487 aa5.17□□□□□ -1.58
CAPN3-210ENST00000561817 AKAP9Q99996 3911 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 MAP1AP78559 2803 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 CTXND1A0A1B0GTU2 59 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 PSMB11A5LHX3 300 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 HELTA6NFD8 242 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 SOX15O60248 233 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 EIF3GO75821 320 aaKnown RBP eCLIP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 HBE1P02100 147 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 MBP02144 154 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 REG1AP05451 166 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 CTRB1P17538 263 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 M6PRP20645 277 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 RPL29P47914 159 aaKnown RBP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 NDPQ00604 133 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 LOXL1Q08397 574 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 FHL3Q13643 280 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 HNF4GQ14541 408 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 ICAM4Q14773 271 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 MMDQ15546 238 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 KLK9Q2XQG4 91 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 C19orf54Q5BKX5 351 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 KLF17Q5JT82 389 aaPredicted RBP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 ZNF506Q5JVG8 444 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 MIC13Q5XKP0 118 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 CTRB2Q6GPI1 263 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 ATRAIDQ6UW56 229 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 SLC16A13Q7RTY0 426 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 Q8N9W7 124 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 OR10G4Q8NGN3 311 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 OR10G9Q8NGN4 311 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 OR10G7Q8NGN6 311 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 OR1P1Q8NH06 330 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 OR2T6Q8NHC8 308 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 SFT2D1Q8WV19 159 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 SRSF12Q8WXF0 261 aaKnown RBP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 FOXC2Q99958 501 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 RARRES2Q99969 163 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 SEC11CQ9BY50 192 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 MEGF9Q9H1U4 602 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 KLK9Q9UKQ9 250 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 F11RQ9Y624 299 aaKnown RBP5.16□□□□□ -1.58
CAPN3-210ENST00000561817 PXMP4Q9Y6I8 212 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 PDZD2O15018 2839 aa5.16□□□□□ -1.58
CAPN3-210ENST00000561817 ABCA1O95477 2261 aa5.15□□□□□ -1.58
CAPN3-210ENST00000561817 IGHV7-81A0A0B4J1V7 117 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 A0A1B0GV50 99 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SMCO3A2RU48 225 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 MAP1LC3B2A6NCE7 125 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 RBFOX3A6NFN3 312 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 B4DSR2 109 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 C17orf112F2Z3M2 114 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 I3L2K1 104 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SCO1O75880 301 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 FSHBP01225 129 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SRP19P09132 144 aaKnown RBP5.15□□□□□ -1.59
CAPN3-210ENST00000561817 SFTA3P0C7M3 94 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 IGHV4-38-2P0DP08 117 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 DEFA4P12838 97 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 FGF8P55075 233 aaPredicted RBP5.15□□□□□ -1.59
CAPN3-210ENST00000561817 CX3CL1P78423 397 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 GUCA2BQ16661 112 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 ACOT6Q3I5F7 207 aaPredicted RBP5.15□□□□□ -1.59
CAPN3-210ENST00000561817 LCN15Q6UWW0 184 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF562Q6V9R5 426 aa5.15□□□□□ -1.59
CAPN3-210ENST00000561817 STPG3Q8N7X2 389 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms