RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PYDC2Q56P42 97 aa18.58■□□□□ 0.56
NME3-202ENST00000561637 LEMD1Q68G75 181 aa18.58■□□□□ 0.56
NME3-202ENST00000561637 UBE2CO00762 179 aa18.57■□□□□ 0.56
NME3-202ENST00000561637 DEFB131AP59861 70 aa18.57■□□□□ 0.56
NME3-202ENST00000561637 RPL11P62913 178 aaKnown RBP18.57■□□□□ 0.56
NME3-202ENST00000561637 IL22RA2Q969J5 263 aa18.57■□□□□ 0.56
NME3-202ENST00000561637 AGRNO00468 2067 aa18.57■□□□□ 0.56
NME3-202ENST00000561637 CCDC160A6NGH7 325 aa18.56■□□□□ 0.56
NME3-202ENST00000561637 NPPCP23582 126 aa18.56■□□□□ 0.56
NME3-202ENST00000561637 BMI1P35226 326 aa18.56■□□□□ 0.56
NME3-202ENST00000561637 RBM38Q9H0Z9 239 aaKnown RBP18.56■□□□□ 0.56
NME3-202ENST00000561637 RABAC1Q9UI14 185 aa18.56■□□□□ 0.56
NME3-202ENST00000561637 HECTD4Q9Y4D8 3996 aa18.56■□□□□ 0.56
NME3-202ENST00000561637 DNASE2O00115 360 aaPredicted RBP18.55■□□□□ 0.56
NME3-202ENST00000561637 NPY1RP25929 384 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 CRYBB3P26998 211 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 P2RY1P47900 373 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 TNFRSF9Q07011 255 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 TMED4Q7Z7H5 227 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 RPP25LQ8N5L8 163 aaKnown RBP18.55■□□□□ 0.56
NME3-202ENST00000561637 METTL26Q96S19 204 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 RBKSQ9H477 322 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 KCNIP3Q9Y2W7 256 aa18.55■□□□□ 0.56
NME3-202ENST00000561637 A0A0B4J2A0 478 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 RPS10-NUDT3A0A1W2PQS6 291 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 OR10J1P30954 320 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 STXBP6Q8NFX7 210 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 RNASEH2CQ8TDP1 164 aaKnown RBP18.54■□□□□ 0.56
NME3-202ENST00000561637 NPIPB3Q92617 1050 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 ACY3Q96HD9 319 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 CSTL1Q9H114 145 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 SHPKQ9UHJ6 478 aa18.54■□□□□ 0.56
NME3-202ENST00000561637 CXorf65A6NEN9 183 aa18.53■□□□□ 0.56
NME3-202ENST00000561637 PAFAH1B2P68402 229 aa18.53■□□□□ 0.56
NME3-202ENST00000561637 SMCO1Q147U7 214 aa18.53■□□□□ 0.56
NME3-202ENST00000561637 OR1S2Q8NGQ3 325 aa18.53■□□□□ 0.56
NME3-202ENST00000561637 SCGB3A2Q96PL1 93 aa18.53■□□□□ 0.56
NME3-202ENST00000561637 HSPB7Q9UBY9 170 aa18.53■□□□□ 0.56
NME3-202ENST00000561637 CCR6P51684 374 aa18.52■□□□□ 0.56
NME3-202ENST00000561637 USF2Q15853 346 aaPredicted RBP18.52■□□□□ 0.56
NME3-202ENST00000561637 U3KQE9 123 aa18.52■□□□□ 0.56
NME3-202ENST00000561637 KIAA1109Q2LD37 5005 aa18.52■□□□□ 0.55
NME3-202ENST00000561637 RYR1P21817 5038 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 MPTX1A8MV57 137 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 K7EQG2 157 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 IFNA10P01566 189 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 SLC25A4P12235 298 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 CCDC190Q86UF4 302 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 LGI3Q8N145 548 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 TOMM5Q8N4H5 51 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 DTD1Q8TEA8 209 aa18.51■□□□□ 0.55
NME3-202ENST00000561637 TRAV30A0A087WSZ9 112 aa18.5■□□□□ 0.55
NME3-202ENST00000561637 ZNF688P0C7X2 276 aa18.5■□□□□ 0.55
NME3-202ENST00000561637 CMC4P56277 68 aaPredicted RBP18.5■□□□□ 0.55
NME3-202ENST00000561637 TMEM231Q9H6L2 316 aa18.5■□□□□ 0.55
NME3-202ENST00000561637 TRAV2A0A0B4J234 112 aa18.49■□□□□ 0.55
NME3-202ENST00000561637 A0A1W2PS18 150 aa18.49■□□□□ 0.55
NME3-202ENST00000561637 KNCNA6PVL3 124 aa18.49■□□□□ 0.55
NME3-202ENST00000561637 CD5P06127 495 aa18.49■□□□□ 0.55
NME3-202ENST00000561637 YPEL3P61236 119 aaPredicted RBP18.49■□□□□ 0.55
NME3-202ENST00000561637 OR1S1Q8NH92 325 aa18.49■□□□□ 0.55
NME3-202ENST00000561637 CA1P00915 261 aaPredicted RBP18.48■□□□□ 0.55
NME3-202ENST00000561637 IL4P05112 153 aa18.48■□□□□ 0.55
NME3-202ENST00000561637 FAUP35544 74 aaKnown RBP18.48■□□□□ 0.55
NME3-202ENST00000561637 DCANP1Q8TF63 244 aa18.48■□□□□ 0.55
NME3-202ENST00000561637 Q8WTZ3 238 aa18.48■□□□□ 0.55
NME3-202ENST00000561637 GLMPQ8WWB7 406 aa18.48■□□□□ 0.55
NME3-202ENST00000561637 PITX3O75364 302 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 SCGB2A1O75556 95 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 HNRNPCP07910 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
NME3-202ENST00000561637 GIG44P09565 113 aaPredicted RBP18.47■□□□□ 0.55
NME3-202ENST00000561637 IAPPP10997 89 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 ANXA3P12429 323 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 VAMP1P23763 118 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 C16orf54Q6UWD8 224 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 GSG1LQ6UXU4 331 aa18.47■□□□□ 0.55
NME3-202ENST00000561637 DEFB4AO15263 64 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 DEDDO75618 318 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 AP3S2P59780 193 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 SRPXP78539 464 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 PPP1R1AQ13522 171 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 OR11H2Q8NH07 326 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 RARRES2Q99969 163 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 U3KQ87 197 aa18.46■□□□□ 0.55
NME3-202ENST00000561637 IGKV1D-37A0A075B6S9 117 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 TOMM40O96008 361 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 PSG1P11464 419 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 S100A5P33763 92 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 TMEM128Q5BJH2 165 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 ETFRF1Q6IPR1 90 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 OR51G1Q8NGK1 321 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 SRRQ9GZT4 340 aa18.45■□□□□ 0.54
NME3-202ENST00000561637 IFNA4P05014 189 aa18.44■□□□□ 0.54
NME3-202ENST00000561637 RD3LP0DJH9 198 aa18.44■□□□□ 0.54
NME3-202ENST00000561637 C4BPBP20851 252 aa18.44■□□□□ 0.54
NME3-202ENST00000561637 TRPT1Q86TN4 253 aaKnown RBP18.44■□□□□ 0.54
NME3-202ENST00000561637 GATAD1Q8WUU5 269 aa18.44■□□□□ 0.54
NME3-202ENST00000561637 NARS2Q96I59 477 aaKnown RBP18.44■□□□□ 0.54
NME3-202ENST00000561637 VPS13DQ5THJ4 4388 aa18.44■□□□□ 0.54
NME3-202ENST00000561637 NUPR2A6NF83 97 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms