RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ZNF286AQ9HBT8 521 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 MED4Q9NPJ6 270 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 IDI2-AS1Q9NZ38 188 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 DNAJC27Q9NZQ0 273 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 OR52A1Q9UKL2 312 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ARFGEF3Q5TH69 2177 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ALPK2Q86TB3 2170 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 KIAA1109Q2LD37 5005 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 TRAV41A0A0B4J266 112 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 A0A1B0GTI1 187 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 NME4O00746 187 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 RTL8CO15255 209 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 RBBP9O75884 186 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 SLC22A5O76082 557 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 OR2A4O95047 310 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 TFF1P04155 84 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 COX4I1P13073 169 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 ATF1P18846 271 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 RAB4AP20338 218 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 MYL9P24844 172 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 CD24P25063 80 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 PAX6P26367 422 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 TALDO1P37837 337 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 PSME3P61289 254 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 CDK5Q00535 292 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 TNFRSF9Q07011 255 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 SMUG1Q53HV7 270 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 ZNF691Q5VV52 312 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 TMEM244Q5VVB8 128 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 GLT8D1Q68CQ7 371 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 CEMP1Q6PRD7 247 aaPredicted RBP2.29□□□□□ -2.04
HERC1-215ENST00000561436 ZFP41Q8N8Y5 198 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 UBAC2Q8NBM4 344 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 PXT1Q8NFP0 134 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 OR51L1Q8NGJ5 315 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 OR5D14Q8NGL3 314 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 OR8D4Q8NGM9 314 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 UBALD1Q8TB05 177 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 GPX8Q8TED1 209 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 C15orf40Q8WUR7 153 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 RTN4IP1Q8WWV3 396 aaPredicted RBP2.29□□□□□ -2.04
HERC1-215ENST00000561436 RCN3Q96D15 328 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 MRPS24Q96EL2 167 aaKnown RBP2.29□□□□□ -2.04
HERC1-215ENST00000561436 NRBF2Q96F24 287 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 MRPL48Q96GC5 212 aaKnown RBP2.29□□□□□ -2.04
HERC1-215ENST00000561436 USMG5Q96IX5 58 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 ZNF488Q96MN9 340 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 AMELYQ99218 206 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 SULT4A1Q9BR01 284 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 OR51V1Q9H2C8 321 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 REEP1Q9H902 201 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 SPACA1Q9HBV2 294 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 ZNF355PQ9NSJ1 428 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 MCUBQ9NWR8 336 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 ENOPH1Q9UHY7 261 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 DYSFO75923 2080 aa2.29□□□□□ -2.04
HERC1-215ENST00000561436 MEIKINA0A087WXM9 373 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 TMEM30CPA0ZSE6 113 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 METTL15A6NJ78 407 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 ZNF670-ZNF695F2Z2N8 137 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 H3BN98 237 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 TEX46H3BTG2 121 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 K7EMT4 169 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 ITGB1BP1O14713 200 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 RBFOX2O43251 390 aaKnown RBP eCLIP2.28□□□□□ -2.04
HERC1-215ENST00000561436 ZNF324O75467 553 aaPredicted RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 YIF1AO95070 293 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 NDUFA3O95167 84 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 LY6G6CO95867 125 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 FAM107AO95990 144 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 GYPBP06028 91 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 MRPL3P09001 348 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 OCM2P0CE71 109 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 OCMP0CE72 109 aaPredicted RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 CTRB1P17538 263 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 PRKACAP17612 351 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 RAB5AP20339 215 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 NFYBP25208 207 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 NPY1RP25929 384 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 PRR3P79522 188 aaKnown RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 AESQ08117 197 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 GPR176Q14439 515 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 ZNF266Q14584 549 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 SSX1Q16384 188 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 MPV17LQ2QL34 196 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 DEFB136Q30KP8 78 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 C5orf47Q569G3 176 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 C6orf183Q5T699 404 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 NXNL2Q5VZ03 156 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 OR2T5Q6IEZ7 315 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 ZNF322Q6U7Q0 402 aaPredicted RBP2.28□□□□□ -2.04
HERC1-215ENST00000561436 ASCL4Q6XD76 172 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 PLEKHG7Q6ZR37 379 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 GID4Q8IVV7 300 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 VKORC1L1Q8N0U8 176 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 STX19Q8N4C7 294 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 OR2T29Q8NH02 315 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 OR52E5Q8NH55 327 aa2.28□□□□□ -2.04
HERC1-215ENST00000561436 RGP1Q92546 391 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms