RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 SYNGR2O43760 224 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 SSSCA1O60232 199 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 CLN5O75503 358 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 OR10J1P30954 320 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 ELLP55199 621 aaPredicted RBP7.63□□□□□ -1.19
HERC1-212ENST00000561348 POLR2GP62487 172 aaKnown RBP eCLIP7.63□□□□□ -1.19
HERC1-212ENST00000561348 IAH1Q2TAA2 248 aaPredicted RBP7.63□□□□□ -1.19
HERC1-212ENST00000561348 AARDQ4LEZ3 155 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 ETFRF1Q6IPR1 90 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 ZNF600Q6ZNG1 722 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 Q8N1Y9 231 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 OR2K2Q8NGT1 345 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 RNASEH2CQ8TDP1 164 aaKnown RBP7.63□□□□□ -1.19
HERC1-212ENST00000561348 SLC35E1Q96K37 410 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 RHPN1-AS1Q9BWJ2 59 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 UBQLN2Q9UHD9 624 aa7.63□□□□□ -1.19
HERC1-212ENST00000561348 TRAV30A0A087WSZ9 112 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 IGHV7-4-1A0A0J9YVY3 117 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 SMCO3A2RU48 225 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 ZFP92A6NM28 416 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 C15orf62A8K5M9 175 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 UPK1BO75841 260 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 SLC25A4P12235 298 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 NKX2-1P43699 371 aaPredicted RBP7.62□□□□□ -1.19
HERC1-212ENST00000561348 RPP30P78346 268 aaKnown RBP7.62□□□□□ -1.19
HERC1-212ENST00000561348 BSXQ3C1V8 233 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 PRSS54Q6PEW0 395 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 LINC00299Q6ZSB3 139 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 SBSPONQ8IVN8 264 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 OR4X1Q8NH49 305 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 Q8WTZ3 238 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 TMEM170AQ8WVE7 144 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 NARS2Q96I59 477 aaKnown RBP7.62□□□□□ -1.19
HERC1-212ENST00000561348 ATP6V0BQ99437 205 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 RNF2Q99496 336 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 PBDC1Q9BVG4 233 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 SMPXQ9UHP9 88 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 TBC1D24Q9ULP9 559 aa7.62□□□□□ -1.19
HERC1-212ENST00000561348 PRKDCP78527 4128 aaKnown RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 FAM90A26D6RGX4 464 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 K7EMT4 169 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 DNASE2O00115 360 aaPredicted RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 PITX3O75364 302 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 APOHP02749 345 aaPredicted RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 SLC25A6P12236 298 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 NPPCP23582 126 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 FCGR2BP31994 310 aaPredicted RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 OR2F1Q13607 317 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 OR8G2PQ6IF36 304 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 TCF24Q7RTU0 167 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 C12orf45Q8N5I9 185 aaPredicted RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 ST8SIA2Q92186 375 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 OR10C1Q96KK4 312 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 CIB3Q96Q77 187 aaPredicted RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 METTL26Q96S19 204 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 SRD5A3Q9H8P0 318 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 PSENENQ9NZ42 101 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 RABAC1Q9UI14 185 aa7.61□□□□□ -1.19
HERC1-212ENST00000561348 STRAPQ9Y3F4 350 aaKnown RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 LSM5Q9Y4Y9 91 aaKnown RBP7.61□□□□□ -1.19
HERC1-212ENST00000561348 DNAH3Q8TD57 4116 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 L7N2F9 121 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 CHEK1O14757 476 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 IL4P05112 153 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 RD3LP0DJH9 198 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 C8orf88P0DMB2 117 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 BMI1P35226 326 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 BCAP31P51572 246 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 DEFA1P59665 94 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 DEFA3P59666 94 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 S100A10P60903 97 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 VAMP2P63027 116 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 AKR1C1Q04828 323 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 ASAH1Q13510 395 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 PVRIGQ6DKI7 326 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 MITD1Q8WV92 249 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 PPP1R14BQ96C90 147 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 U3KQK5 164 aa7.6□□□□□ -1.19
HERC1-212ENST00000561348 TRAV25A0A0B4J276 109 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 OR4C46A6NHA9 309 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 DFFBO76075 338 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 IGKV1-17P01599 117 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 IGLC1P0CG04 106 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 NHLRC4P0CG21 123 aaPredicted RBP7.59□□□□□ -1.19
HERC1-212ENST00000561348 RRAS2P62070 204 aaPredicted RBP7.59□□□□□ -1.19
HERC1-212ENST00000561348 PAFAH1B2P68402 229 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 IFITM3Q01628 133 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 GAMTQ14353 236 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 NRARPQ7Z6K4 114 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 ZBTB8BQ8NAP8 495 aaPredicted RBP7.59□□□□□ -1.19
HERC1-212ENST00000561348 STXBP6Q8NFX7 210 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 OR51G1Q8NGK1 321 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 GRAMD2BQ96HH9 432 aa7.59□□□□□ -1.19
HERC1-212ENST00000561348 SPAG8Q99932 426 aaPredicted RBP7.59□□□□□ -1.19
HERC1-212ENST00000561348 TMEM231Q9H6L2 316 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms