RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 MTORP42345 2549 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 HIVEP1P15822 2718 aa8.07□□□□□ -1.12
USP3-219ENST00000561326 ZNF469Q96JG9 3925 aaPredicted RBP8.07□□□□□ -1.12
USP3-219ENST00000561326 CSMD1Q96PZ7 3565 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 IGKV1OR2-108A0A075B7D4 117 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 PF4V1P10720 104 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 PPIFP30405 207 aaKnown RBP8.06□□□□□ -1.12
USP3-219ENST00000561326 C15orf32Q32M92 178 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 Q6ZS46 218 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 S100A7AQ86SG5 101 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 STPG3Q8N7X2 389 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 BPIFCQ8NFQ6 507 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 PCNPQ8WW12 178 aaKnown RBP8.06□□□□□ -1.12
USP3-219ENST00000561326 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 RNF2Q99496 336 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 MED9Q9NWA0 146 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 PLA2G2EQ9NZK7 142 aa8.06□□□□□ -1.12
USP3-219ENST00000561326 ELOA3CA0A087WX78 387 aaPredicted RBP8.05□□□□□ -1.12
USP3-219ENST00000561326 FAM181BA6NEQ2 426 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 NUPL2O15504 423 aaKnown RBP8.05□□□□□ -1.12
USP3-219ENST00000561326 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 RNASE1P07998 156 aaKnown RBP8.05□□□□□ -1.12
USP3-219ENST00000561326 RD3LP0DJH9 198 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 FCGR2BP31994 310 aaPredicted RBP8.05□□□□□ -1.12
USP3-219ENST00000561326 TPPP2P59282 170 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 HILS1P60008 231 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 YPEL3P61236 119 aaPredicted RBP8.05□□□□□ -1.12
USP3-219ENST00000561326 RHOBP62745 196 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 PRR20EP86478 221 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 PRR20CP86479 221 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 PRR20DP86480 221 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 PRR20BP86481 221 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 PRR20AP86496 221 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 FAM209BQ5JX69 171 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 TEX38Q6PEX7 206 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 Q8N2B8 174 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 COMMD1Q8N668 190 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 OR1L4Q8NGR5 311 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 Q8WTZ3 238 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 GATAD1Q8WUU5 269 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 SFT2D1Q8WV19 159 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 PFDN5Q99471 154 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 HRH4Q9H3N8 390 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 ZNF702PQ9H963 129 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 DNAJC4Q9NNZ3 241 aa8.05□□□□□ -1.12
USP3-219ENST00000561326 MRPL36Q9P0J6 103 aaKnown RBP8.05□□□□□ -1.12
USP3-219ENST00000561326 IGKV1D-37A0A075B6S9 117 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 TRAV1-1A0A0B4J248 108 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 CTXND1A0A1B0GTU2 59 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 PSMB11A5LHX3 300 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 IGHG4P01861 327 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 CLEC3BP05452 202 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 LINC00869P0C866 280 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 IGLC1P0CG04 106 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 S100A7P31151 101 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 FHITP49789 147 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 RAB9AP51151 201 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 ZNF90Q03938 601 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 FAM122CQ6P4D5 195 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 SPSB3Q6PJ21 355 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 Q71RC1 249 aaPredicted RBP8.04□□□□□ -1.12
USP3-219ENST00000561326 RPP25LQ8N5L8 163 aaKnown RBP8.04□□□□□ -1.12
USP3-219ENST00000561326 MBD3L1Q8WWY6 194 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 MARC2Q969Z3 335 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 RCC1LQ96I51 464 aaKnown RBP8.04□□□□□ -1.12
USP3-219ENST00000561326 VSIRQ9H7M9 311 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 NF1P21359 2839 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
USP3-219ENST00000561326 MFSD2BA6NFX1 497 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 SEC14L6B5MCN3 397 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 INAFM1C9JVW0 142 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 COX7A2P2O60397 106 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 HYPMO75409 117 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 YIF1AO95070 293 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 TOMM40O96008 361 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 ELANEP08246 267 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 OR5G3P0C626 314 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 CDC34P49427 236 aaPredicted RBP8.03□□□□□ -1.12
USP3-219ENST00000561326 CFHR3Q02985 330 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 FOXE3Q13461 319 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 TIGITQ495A1 244 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 C10orf113Q5VZT2 155 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 IL34Q6ZMJ4 242 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 SLC7A5P1Q8MH63 180 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 OR51G1Q8NGK1 321 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 LYPD6BQ8NI32 183 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 ZNF502Q8TBZ5 544 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 RAB24Q969Q5 203 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 GSX1Q9H4S2 264 aaPredicted RBP8.03□□□□□ -1.12
USP3-219ENST00000561326 ESM1Q9NQ30 184 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 S4R3C0 116 aa8.03□□□□□ -1.12
USP3-219ENST00000561326 RAB19A4D1S5 217 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 MAP1LC3B2A6NCE7 125 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 OR2T8A6NH00 312 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 TCF21O43680 179 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms