RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 MZT2BQ6NZ67 158 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 ZNF600Q6ZNG1 722 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 SLC16A13Q7RTY0 426 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 ZBTB8BQ8NAP8 495 aaPredicted RBP10.41□□□□□ -0.74
TPM1-230ENST00000561266 MARC2Q969Z3 335 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 RNF2Q99496 336 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 CACFD1Q9UGQ2 172 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 IGHV3-66A0A0C4DH42 116 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 IFNA4P05014 189 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 CD81P60033 236 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 IAH1Q2TAA2 248 aaPredicted RBP10.4□□□□□ -0.74
TPM1-230ENST00000561266 DEFB125Q8N687 156 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 ACY3Q96HD9 319 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 NEURL2Q9BR09 285 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
TPM1-230ENST00000561266 IGKV1OR2-108A0A075B7D4 117 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 RPS10-NUDT3A0A1W2PQS6 291 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 PMS2P5A8MQ11 134 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 MED6O75586 246 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 IFNA21P01568 189 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 MBPP02686 304 aaPredicted RBP10.39□□□□□ -0.75
TPM1-230ENST00000561266 SLC25A4P12235 298 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 OR10J1P30954 320 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
TPM1-230ENST00000561266 SPANXN5Q5MJ07 72 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 FAM90A2PQ658T7 463 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 C12orf45Q8N5I9 185 aaPredicted RBP10.39□□□□□ -0.75
TPM1-230ENST00000561266 ST8SIA2Q92186 375 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 GSKIPQ9P0R6 139 aa10.39□□□□□ -0.75
TPM1-230ENST00000561266 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
TPM1-230ENST00000561266 RCL1Q9Y2P8 373 aaKnown RBP10.39□□□□□ -0.75
TPM1-230ENST00000561266 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
TPM1-230ENST00000561266 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
TPM1-230ENST00000561266 A8MZ25 164 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 SSSCA1O60232 199 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 SCGB1D2O95969 90 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 IL5P05113 134 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
TPM1-230ENST00000561266 IL15RAQ13261 267 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 OR1S2Q8NGQ3 325 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 ENKURQ8TC29 256 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 VSIRQ9H7M9 311 aa10.38□□□□□ -0.75
TPM1-230ENST00000561266 TRAV30A0A087WSZ9 112 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 TRAV25A0A0B4J276 109 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 TSPAN4O14817 238 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 GPX4P36969 197 aaPredicted RBP10.37□□□□□ -0.75
TPM1-230ENST00000561266 YPEL3P61236 119 aaPredicted RBP10.37□□□□□ -0.75
TPM1-230ENST00000561266 ZNF90Q03938 601 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 DCTN2Q13561 401 aaKnown RBP10.37□□□□□ -0.75
TPM1-230ENST00000561266 USF2Q15853 346 aaPredicted RBP10.37□□□□□ -0.75
TPM1-230ENST00000561266 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 LINC00322Q6ZN03 302 aaPredicted RBP10.37□□□□□ -0.75
TPM1-230ENST00000561266 GTSCR1Q86UQ5 136 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 NOXA1Q86UR1 476 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 C11orf1Q9H5F2 150 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 PSENENQ9NZ42 101 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 UBQLN2Q9UHD9 624 aa10.37□□□□□ -0.75
TPM1-230ENST00000561266 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 FAM25EA8MYX2 175 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 OR11H12B2RN74 326 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 SIX6O95475 246 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 PSG1P11464 419 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 CRYBB3P26998 211 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 ATP5IP56385 69 aaPredicted RBP10.36□□□□□ -0.75
TPM1-230ENST00000561266 ARL16Q0P5N6 197 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 TMEM182Q6ZP80 229 aaPredicted RBP10.36□□□□□ -0.75
TPM1-230ENST00000561266 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
TPM1-230ENST00000561266 STPG3Q8N7X2 389 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 CIB3Q96Q77 187 aaPredicted RBP10.36□□□□□ -0.75
TPM1-230ENST00000561266 MARVELD1Q9BSK0 173 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 U3KQE9 123 aa10.36□□□□□ -0.75
TPM1-230ENST00000561266 C7orf66A4D0T2 115 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 C5orf51A6NDU8 294 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 INMT-MINDY4F8WBC2 141 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 K7EPK0 472 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 DFFBO76075 338 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 TOMM40O96008 361 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 RAB11AP62491 216 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 ZNF124Q15973 351 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 TMEM14EPQ6UXP3 125 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 TCF24Q7RTU0 167 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 GBGT1Q8N5D6 347 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 C2orf50Q96LR7 162 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 STRAPQ9Y3F4 350 aaKnown RBP10.35□□□□□ -0.75
TPM1-230ENST00000561266 AGRNO00468 2067 aa10.35□□□□□ -0.75
TPM1-230ENST00000561266 METTL15P1P0C7V9 234 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 RD3LP0DJH9 198 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 NPPCP23582 126 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 TFPI2P48307 235 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 OR2F1Q13607 317 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 HAGHQ16775 308 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 GSG1LQ6UXU4 331 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 ACOT7LQ6ZUV0 252 aa10.34□□□□□ -0.75
TPM1-230ENST00000561266 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms