RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 RELQ04864 619 aaPredicted RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 USF2Q15853 346 aaPredicted RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 CLEC12BQ2HXU8 276 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 HLA-DRB5Q30154 266 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 KRTCAP3Q53RY4 240 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 C2orf83Q53S99 150 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 RPL39P5Q59GN2 51 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 SPINK9Q5DT21 86 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 CENPWQ5EE01 88 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 SPATA31B1PQ5VZV4 182 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 STUMQ69YW2 141 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 OR4A47Q6IF82 309 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 FAM71F2Q6NXP2 309 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 WDR73Q6P4I2 378 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 IGFL2Q6UWQ7 119 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 LINC00696Q6ZRV3 163 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 C9orf139Q6ZV77 190 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 FAM231DQ6ZW35 169 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 NIT1Q86X76 327 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 MMD2Q8IY49 270 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 GCNT2Q8N0V5 402 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 TPRX1Q8N7U7 411 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 ST6GALNAC3Q8NDV1 305 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 OR5AU1Q8NGC0 362 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 OR1L6Q8NGR2 347 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 OR1L8Q8NGR8 309 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 OR5B3Q8NH48 314 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 OR4A16Q8NH70 328 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 MBD3L2Q8NHZ7 208 aaPredicted RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 OCC1Q8TAD7 63 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 PPP1R35Q8TAP8 253 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 SSMEM1Q8WWF3 244 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 CORO2AQ92828 525 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 SMIM12Q96EX1 92 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 FAM167A-AS1Q96KT0 104 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 WFIKKN1Q96NZ8 548 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 TBX15Q96SF7 602 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 RNF2Q99496 336 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 S1PR3Q99500 378 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 NABP2Q9BQ15 211 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 MIEN1Q9BRT3 115 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 DCTN5Q9BTE1 182 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 VAMP8Q9BV40 100 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 C19orf24Q9BVV8 132 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 COMMD5Q9GZQ3 224 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 GNB4Q9HAV0 340 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 LPAR2Q9HBW0 351 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 NPVFQ9HCQ7 196 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 SEPSECSQ9HD40 501 aaKnown RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 HEYLQ9NQ87 328 aaPredicted RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 ZNF586Q9NXT0 402 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 BET1LQ9NYM9 111 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 C1RLQ9NZP8 487 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 MRPL27Q9P0M9 148 aaKnown RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 GNG12Q9UBI6 72 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 IL17BQ9UHF5 180 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 PRNDQ9UKY0 176 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 SLC25A15Q9Y619 301 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 LAMA1P25391 3075 aa1.97□□□□□ -2.09
SPG11-223ENST00000560858 RANBP2P49792 3224 aaKnown RBP1.97□□□□□ -2.09
SPG11-223ENST00000560858 IGKV1OR2-108A0A075B7D4 117 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 KBTBD11-OT1A0A1B0GTJ5 212 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 A0A1B0GXF2 115 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 C20orf202A1L168 122 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 IZUMO1RA6ND01 250 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 MBD3L5A6NJ08 208 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF705FA8MVS1 300 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 DEFB108AA8MXU0 73 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 SLC17A3O00476 420 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 UPK2O00526 184 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 FCN1O00602 326 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF253O75346 499 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 FSTL3O95633 263 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 SCGB1D1O95968 90 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 CA2P00918 260 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 GPX1P07203 203 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 SP9P0CG40 484 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF705DP0CH99 300 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF705BP0CI00 300 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 SAA1P0DJI8 122 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 C8orf88P0DMB2 117 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 IGLC2P0DOY2 106 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 IGLC3P0DOY3 106 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 IRF2P14316 349 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 MYCNOSP40205 109 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 IER3P46695 156 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 GNG4P50150 75 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 PPOXP50336 477 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF137PP52743 207 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TAS2R45P59539 299 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 MRPS11P82912 194 aaKnown RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 RPL19P84098 196 aaKnown RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 ZNF90Q03938 601 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 RAB31Q13636 194 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 KLF5Q13887 457 aaPredicted RBP1.96□□□□□ -2.1
SPG11-223ENST00000560858 EDDM3AQ14507 147 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 PSG5Q15238 335 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 TIGITQ495A1 244 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 CT45A1Q5HYN5 189 aa1.96□□□□□ -2.1
SPG11-223ENST00000560858 UTF1Q5T230 341 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms