RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 TEX38Q6PEX7 206 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 Q6ZRG5 221 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 CENPVQ7Z7K6 275 aaPredicted RBP5.04□□□□□ -1.6
SPG11-221ENST00000560299 S100A7AQ86SG5 101 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 Q8N2B8 174 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 OR4X1Q8NH49 305 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 TMED6Q8WW62 240 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 NPIPB3Q92617 1050 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 EEF1AKMT3Q96AZ1 226 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 FANCD2OSQ96PS1 177 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 ATP6V0BQ99437 205 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 TRGV9Q99603 122 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 NPCDR1Q9BY65 106 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 FNDC4Q9H6D8 234 aaPredicted RBP5.04□□□□□ -1.6
SPG11-221ENST00000560299 ZNF702PQ9H963 129 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 C21orf62Q9NYP8 219 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 LINC00527Q9UJ94 153 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 KLK9Q9UKQ9 250 aa5.04□□□□□ -1.6
SPG11-221ENST00000560299 TCRBV4S1A1TA0A5B7 111 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 TEX46H3BTG2 121 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 K7EIM0 57 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 RGS13O14921 159 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 AGPAT2O15120 278 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 NUPL2O15504 423 aaKnown RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 CLN5O75503 358 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 NDUFB8O95169 186 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 NDUFA7O95182 113 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 TSPAN15O95858 294 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 IGHG4P01861 327 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 PRH1P02810 166 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 ELANEP08246 267 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 PF4V1P10720 104 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 MDKP21741 143 aaPredicted RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 PPIFP30405 207 aaKnown RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 OR10J1P30954 320 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 FCGR2BP31994 310 aaPredicted RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 RPL29P47914 159 aaKnown RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 SULT1A2P50226 295 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 TPPP2P59282 170 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 RAB2AP61019 212 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 B2MP61769 119 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 MLANAQ16655 118 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 ACOT6Q3I5F7 207 aaPredicted RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 Q56UQ5 140 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 C19orf54Q5BKX5 351 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 PXDC1Q5TGL8 231 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 DPPA3Q6W0C5 159 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 THAP8Q8NA92 274 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 BPIFCQ8NFQ6 507 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 SAT2Q96F10 170 aaPredicted RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 NOL4LQ96MY1 436 aaPredicted RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 MS4A10Q96PG2 267 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 RSG1Q9BU20 258 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 C19orf24Q9BVV8 132 aa5.03□□□□□ -1.6
SPG11-221ENST00000560299 LSM4Q9Y4Z0 139 aaKnown RBP5.03□□□□□ -1.6
SPG11-221ENST00000560299 IGHV3-21A0A0B4J1V1 117 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 ZNF705EA8MWA4 302 aaPredicted RBP5.02□□□□□ -1.61
SPG11-221ENST00000560299 IGLV1-40P01703 118 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 IGHV3-48P01763 117 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 RD3LP0DJH9 198 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 M6PRP20645 277 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 RAB9AP51151 201 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 YPEL3P61236 119 aaPredicted RBP5.02□□□□□ -1.61
SPG11-221ENST00000560299 RUNX1Q01196 453 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 IFITM2Q01629 132 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 ZNF616Q08AN1 781 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 FOXL1Q12952 345 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 FOXE3Q13461 319 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 TMEM41BQ5BJD5 291 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 FFAR4Q5NUL3 377 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 SPSB3Q6PJ21 355 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 TMEM182Q6ZP80 229 aaPredicted RBP5.02□□□□□ -1.61
SPG11-221ENST00000560299 Q6ZS46 218 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 C19orf35Q6ZS72 473 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 CYP2G1PQ6ZSU1 146 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 Q6ZSV7 163 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 OR4X2Q8NGF9 303 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 OR1L4Q8NGR5 311 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 OR4F5Q8NH21 305 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 Q8WTZ3 238 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 PFDN5Q99471 154 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 RNF2Q99496 336 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 MGST2Q99735 147 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 GGTLC1Q9BX51 225 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 ACTR3CQ9C0K3 210 aaPredicted RBP5.02□□□□□ -1.61
SPG11-221ENST00000560299 SH3BGRL3Q9H299 93 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 C16orf95Q9H693 158 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 ESM1Q9NQ30 184 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 SLC39A9Q9NUM3 307 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 PFDN2Q9UHV9 154 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 RNF24Q9Y225 148 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 DMRT1Q9Y5R6 373 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 PXMP4Q9Y6I8 212 aa5.02□□□□□ -1.61
SPG11-221ENST00000560299 ELOA3CA0A087WX78 387 aaPredicted RBP5.01□□□□□ -1.61
SPG11-221ENST00000560299 OR2T8A6NH00 312 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 HBE1P02100 147 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 CLEC3BP05452 202 aa5.01□□□□□ -1.61
SPG11-221ENST00000560299 PSMB8P28062 276 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms