RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 DUXBA0A1W2PPF3 345 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 RPS10-NUDT3A0A1W2PQS6 291 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 C9orf170A2RU37 121 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 OR4C46A6NHA9 309 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 DFFBO76075 338 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 HOXB5P09067 269 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 IAPPP10997 89 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 ANXA7P20073 488 aaKnown RBP8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 OR10J1P30954 320 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 APRG1Q8IVJ8 170 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 ACY3Q96HD9 319 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 GGTLC1Q9BX51 225 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 MAGT1Q9H0U3 335 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 CACFD1Q9UGQ2 172 aa8.64□□□□□ -1.03
RABGGTA-216ENST00000560243 LOC102724200A0A096LPH7 203 aaPredicted RBP8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 NAP1L6A6NFF2 107 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 MPTX1A8MV57 137 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 PLA2G10O15496 165 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 ADAP1O75689 374 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 SLC25A4P12235 298 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 NPPCP23582 126 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 CASC10Q5T4H9 136 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 GGNBP1Q5YKI7 109 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 OR1S2Q8NGQ3 325 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 TMED3Q9Y3Q3 217 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 U3KQ87 197 aa8.63□□□□□ -1.03
RABGGTA-216ENST00000560243 TRAV30A0A087WSZ9 112 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 IFNA4P05014 189 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 SLC25A6P12236 298 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 RPL35AP18077 110 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 CRYBB3P26998 211 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 UBE2MP61081 183 aaKnown RBP8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 DHRS2Q13268 280 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 ZFAND6Q6FIF0 208 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 NOXA1Q86UR1 476 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 FAM24BQ8N5W8 94 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 METTL26Q96S19 204 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 MS4A6AQ9H2W1 248 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
RABGGTA-216ENST00000560243 PIGBOS1A0A0B4J2F0 54 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 WRBO00258 174 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 OR4E1P0C645 316 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 LYL1P12980 280 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 P2RY1P47900 373 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 YPEL3P61236 119 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 GAMTQ14353 236 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 USF2Q15853 346 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 ETFRF1Q6IPR1 90 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 LYG2Q86SG7 212 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 Q8WTZ3 238 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 OVOL2Q9BRP0 275 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 U3KQE9 123 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 AGRNO00468 2067 aa8.61□□□□□ -1.03
RABGGTA-216ENST00000560243 IGKV1D-37A0A075B6S9 117 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 CENPXA8MT69 81 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 FAM90A26D6RGX4 464 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 SYNGR2O43760 224 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 SCGB2A1O75556 95 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 TOMM40O96008 361 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 IL4P05112 153 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 RD3LP0DJH9 198 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 PSG1P11464 419 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 BMI1P35226 326 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 ZNF90Q03938 601 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 C4orf46Q504U0 113 aa8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 C7orf50Q9BRJ6 194 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 PAIP2BQ9ULR5 123 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-216ENST00000560243 A0A1W2PS18 150 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 A6NHS1 94 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 H3BP45 60 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 DNASE2O00115 360 aaPredicted RBP8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 LYRM1O43325 122 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 MED6O75586 246 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 GPX4P36969 197 aaPredicted RBP8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 ATP5IP56385 69 aaPredicted RBP8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 DEFB131AP59861 70 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 POLR2GP62487 172 aaKnown RBP eCLIP8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 PAFAH1B2P68402 229 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 DEFB135Q30KP9 77 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 LEMD1Q68G75 181 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 STXBP6Q8NFX7 210 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 OR51G1Q8NGK1 321 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 GLMPQ8WWB7 406 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 C20orf85Q9H1P6 137 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 TMEM231Q9H6L2 316 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 RABAC1Q9UI14 185 aa8.59□□□□□ -1.03
RABGGTA-216ENST00000560243 IGKV1OR2-108A0A075B7D4 117 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 ZFP92A6NM28 416 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 PRSS46E5RG02 174 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 K7EQG2 157 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 CD5P06127 495 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 APOC4P55056 127 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 ID3Q02535 119 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 OR2F1Q13607 317 aa8.58□□□□□ -1.04
RABGGTA-216ENST00000560243 SPANXN5Q5MJ07 72 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms