RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GPR141Q7Z602 305 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 NOXA1Q86UR1 476 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 LHFPL1Q86WI0 220 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 FAM219AQ8IW50 185 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 OR1S2Q8NGQ3 325 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 OR52E5Q8NH55 327 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 TERB2Q8NHR7 220 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 RNASEH2CQ8TDP1 164 aaKnown RBP6.62□□□□□ -1.35
HDDC3-204ENST00000559834 C15orf40Q8WUR7 153 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 HEYLQ9NQ87 328 aaPredicted RBP6.62□□□□□ -1.35
HDDC3-204ENST00000559834 CACFD1Q9UGQ2 172 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 RSL24D1Q9UHA3 163 aaKnown RBP6.62□□□□□ -1.35
HDDC3-204ENST00000559834 PFDN2Q9UHV9 154 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 U3KQE9 123 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 AGRNO00468 2067 aa6.62□□□□□ -1.35
HDDC3-204ENST00000559834 TMEM189A5PLL7 270 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 GSTZ1O43708 216 aaPredicted RBP6.61□□□□□ -1.35
HDDC3-204ENST00000559834 HPGDSO60760 199 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 IFNA21P01568 189 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 AMBPP02760 352 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 CD3DP04234 171 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 IGLC1P0CG04 106 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 SPART-AS1P0CW21 52 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 MED14OSP0DP75 135 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 UCP1P25874 307 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 OR10J1P30954 320 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 DHODHQ02127 395 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 BSXQ3C1V8 233 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 C2orf83Q53S99 150 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 CLVS1Q8IUQ0 354 aaPredicted RBP6.61□□□□□ -1.35
HDDC3-204ENST00000559834 GLMPQ8WWB7 406 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 MRPL36Q9P0J6 103 aaKnown RBP6.61□□□□□ -1.35
HDDC3-204ENST00000559834 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 KLK11Q9UBX7 282 aa6.61□□□□□ -1.35
HDDC3-204ENST00000559834 TEX13DA0A0J9YY54 714 aaPredicted RBP6.6□□□□□ -1.35
HDDC3-204ENST00000559834 PRSS29PA6NIE9 313 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 H3BMM0 161 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 CDS2O95674 445 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 IL4P05112 153 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 RD3LP0DJH9 198 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 RND2P52198 227 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 SCGB2B2Q4G0G5 96 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 AARDQ4LEZ3 155 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 PRSS54Q6PEW0 395 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 Q6ZRM9 215 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 AP3S1Q92572 193 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 FAM210BQ96KR6 192 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 ABHD1Q96SE0 405 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 NEU1Q99519 415 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 NRN1Q9NPD7 142 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 MTFP1Q9UDX5 166 aa6.6□□□□□ -1.35
HDDC3-204ENST00000559834 TEX48A0A1B0GUV7 120 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 CEBPZOSA8MTT3 80 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 FAM90A26D6RGX4 464 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 BUB3O43684 328 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 RAB3DO95716 219 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 IFNA10P01566 189 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 NUP62P37198 522 aaPredicted RBP6.59□□□□□ -1.35
HDDC3-204ENST00000559834 NKX2-1P43699 371 aaPredicted RBP6.59□□□□□ -1.35
HDDC3-204ENST00000559834 TAS2R19P59542 299 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 VBP1P61758 197 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 NCS1P62166 190 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 RNASE12Q5GAN4 147 aaKnown RBP6.59□□□□□ -1.35
HDDC3-204ENST00000559834 SIGLEC15Q6ZMC9 328 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 ZNF767PQ75MW2 155 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 TMEM229BQ8NBD8 167 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 SLC24A4Q8NFF2 622 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 OR13C8Q8NGS7 320 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 OR52I2Q8NH67 350 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 NPIPB3Q92617 1050 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 RBPMSQ93062 196 aaKnown RBP6.59□□□□□ -1.35
HDDC3-204ENST00000559834 FUNDC2Q9BWH2 189 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 TMEM222Q9H0R3 208 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 CELA1Q9UNI1 258 aa6.59□□□□□ -1.35
HDDC3-204ENST00000559834 C14orf166Q9Y224 244 aaKnown RBP6.59□□□□□ -1.35
HDDC3-204ENST00000559834 A0A0G2JRQ6 117 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 A0A1B0GVY2 172 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 M0R2N4 97 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 TOMM40O96008 361 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 CD74P04233 296 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 HLA-DRB4P13762 266 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 ID1P41134 155 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 SURF2Q15527 256 aaPredicted RBP6.58□□□□□ -1.36
HDDC3-204ENST00000559834 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
HDDC3-204ENST00000559834 SOHLH1Q5JUK2 328 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 STEAP1BQ6NZ63 245 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 ZNF705AQ6ZN79 300 aaPredicted RBP6.58□□□□□ -1.36
HDDC3-204ENST00000559834 UBE2DNLQ8IWF7 75 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 MARCH1Q8TCQ1 289 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 GLYATL2Q8WU03 294 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 GPR146Q96CH1 333 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 EXTL2Q9UBQ6 330 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 CACNG5Q9UF02 275 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 U3KQ87 197 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 HLA-DRB4X5D2U9 266 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 KMT2AQ03164 3969 aa6.58□□□□□ -1.36
HDDC3-204ENST00000559834 ZNF705FA8MVS1 300 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms