RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 A0A087WX48 190 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 IGKV1-9A0A0C4DH69 117 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 A0A1B0GX51 115 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 MEIS3P1A6NDR6 274 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 C11orf86A6NJI1 115 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 H3BT86 120 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 J3KT08 172 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 M0R378 163 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 SLC22A1O15245 554 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 CST8O60676 142 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 IGKV1-16P04430 117 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 BPGMP07738 259 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 HRES1P13985 223 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 GPX2P18283 190 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 NFYBP25208 207 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 CCR2P41597 374 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 EIF5AP63241 154 aaKnown RBP1.94□□□□□ -2.1
SPG11-218ENST00000559754 PLCXD2Q0VAA5 305 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 FOXF1Q12946 379 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 KISS1Q15726 138 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 RTL8BQ17RB0 113 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 PABPC1L2AQ5JQF8 200 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 FKBP1CQ5VVH2 108 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 Q6ZS52 159 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 BPIFA4PQ86YQ2 179 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 RPP25LQ8N5L8 163 aaKnown RBP1.94□□□□□ -2.1
SPG11-218ENST00000559754 Q8NDZ9 215 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 OR52R1Q8NGF1 315 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 OR8D4Q8NGM9 314 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 PFN4Q8NHR9 129 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 CMTM2Q8TAZ6 248 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 TCEAL4Q96EI5 215 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 TEX37Q96LM6 180 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 YPEL2Q96QA6 119 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 MRPL16Q9NX20 251 aaKnown RBP1.94□□□□□ -2.1
SPG11-218ENST00000559754 NAT8Q9UHE5 227 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 TIMM9Q9Y5J7 89 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 MINOS1-NBL1R4GNA1 71 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 HSPE1-MOB4S4R3N1 261 aa1.94□□□□□ -2.1
SPG11-218ENST00000559754 MALRD1Q5VYJ5 2156 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 BCL9O00512 1426 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 CPAMD8Q8IZJ3 1885 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 BORCS7-ASMTA0A0B4J1R7 106 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 TRDV1A0A1B0GX56 115 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 ARRDC5A6NEK1 342 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 DEGS1O15121 323 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 TCL1BO95988 128 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 BCL2P10415 239 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 RPL7P18124 248 aaKnown RBP1.93□□□□□ -2.1
SPG11-218ENST00000559754 SRP9P49458 86 aaKnown RBP1.93□□□□□ -2.1
SPG11-218ENST00000559754 UBE2BP63146 152 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 IGFBP7Q16270 282 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 CCDC153Q494R4 210 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 PRR15Q8IV56 129 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 MSRB3Q8IXL7 192 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 SIGLECL1Q8N7X8 197 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 OR4D11Q8NGI4 311 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 WFDC5Q8TCV5 224 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 DCANP1Q8TF63 244 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 HIST1H2BLQ99880 126 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 FAM107BQ9H098 131 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 TMEM138Q9NPI0 162 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 MARCOQ9UEW3 520 aaPredicted RBP1.93□□□□□ -2.1
SPG11-218ENST00000559754 EPDR1Q9UM22 224 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 MED31Q9Y3C7 131 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 ARHGAP32A7KAX9 2087 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 CACNA1DQ01668 2161 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 NUP98P52948 1817 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 GPR179Q6PRD1 2367 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 TRIOBPQ9H2D6 2365 aa1.93□□□□□ -2.1
SPG11-218ENST00000559754 ARHGEF28Q8N1W1 1705 aaKnown RBP1.92□□□□□ -2.1
SPG11-218ENST00000559754 TRAV36DV7A0A075B6V5 113 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 C3orf84H3BNL1 204 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 H7C2G1 150 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 RPS3P23396 243 aaKnown RBP eCLIP1.92□□□□□ -2.1
SPG11-218ENST00000559754 RNASE4P34096 147 aaKnown RBP1.92□□□□□ -2.1
SPG11-218ENST00000559754 INSL3P51460 131 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 FXYD2P54710 66 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 SUPT4H1P63272 117 aaKnown RBP1.92□□□□□ -2.1
SPG11-218ENST00000559754 PSG9Q00887 426 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 OR8B8Q15620 311 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 DEFB134Q4QY38 66 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 C1orf140Q5VVS0 124 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 C22orf39Q6P5X5 142 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 SLC35E3Q7Z769 313 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 OR4C16Q8NGL9 310 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 PPTC7Q8NI37 304 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 STAG3L4Q8TBR4 150 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 BORCS8Q96FH0 119 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 CARD19Q96LW7 228 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 SLC25A21Q9BQT8 299 aaPredicted RBP1.92□□□□□ -2.1
SPG11-218ENST00000559754 GINS4Q9BRT9 223 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 TMEM126AQ9H061 195 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 HHLA3Q9XRX5 114 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 N4BP2Q86UW6 1770 aaPredicted RBP1.92□□□□□ -2.1
SPG11-218ENST00000559754 SBF1O95248 1867 aa1.92□□□□□ -2.1
SPG11-218ENST00000559754 SEC16AO15027 2179 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms