RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
USP3-214ENST00000559718 MIXL1Q9H2W2 232 aa8.45□□□□□ -1.06
USP3-214ENST00000559718 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 GABARAPO95166 117 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 SMIM18P0DKX4 95 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 TAS2R19P59542 299 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 SPCS3P61009 180 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 ACTL10Q5JWF8 245 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 GPR107Q5VW38 600 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 STEAP1BQ6NZ63 245 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 PRSS54Q6PEW0 395 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 GLYATL2Q8WU03 294 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 TMEM170AQ8WVE7 144 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 RTBDNQ9BSG5 229 aaPredicted RBP8.44□□□□□ -1.06
USP3-214ENST00000559718 KRTAP9-2Q9BYQ4 174 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 TMEM222Q9H0R3 208 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 CLEC5AQ9NY25 188 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 CACNG5Q9UF02 275 aa8.44□□□□□ -1.06
USP3-214ENST00000559718 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
USP3-214ENST00000559718 IGLL5B9A064 214 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 NXPH3O95157 252 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 CDS2O95674 445 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 IGLC1P0CG04 106 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 RND2P52198 227 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 MEF2DQ14814 521 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 AARDQ4LEZ3 155 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 SELENOHQ8IZQ5 122 aaKnown RBP8.43□□□□□ -1.06
USP3-214ENST00000559718 OR52E5Q8NH55 327 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 GPR146Q96CH1 333 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 GRAMD2BQ96HH9 432 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
USP3-214ENST00000559718 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 U3KQE9 123 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 X6R8D5 127 aa8.43□□□□□ -1.06
USP3-214ENST00000559718 TEX13DA0A0J9YY54 714 aaPredicted RBP8.42□□□□□ -1.06
USP3-214ENST00000559718 RPS10-NUDT3A0A1W2PQS6 291 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 GABARAPH6UMI1 98 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 CTDSP2O14595 271 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 SPP1P10451 314 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 OR10J1P30954 320 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 HTR2BP41595 481 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 DHODHQ02127 395 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 DHRS2Q13268 280 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 USF2Q15853 346 aaPredicted RBP8.42□□□□□ -1.06
USP3-214ENST00000559718 TMEM268Q5VZI3 342 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 C16orf54Q6UWD8 224 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 FAM219AQ8IW50 185 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 CSNK1G2-AS1Q8NCQ2 148 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 GLMPQ8WWB7 406 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 RBPMSQ93062 196 aaKnown RBP8.42□□□□□ -1.06
USP3-214ENST00000559718 NARS2Q96I59 477 aaKnown RBP8.42□□□□□ -1.06
USP3-214ENST00000559718 RAB40CQ96S21 281 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 NAA60Q9H7X0 242 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 HEYLQ9NQ87 328 aaPredicted RBP8.42□□□□□ -1.06
USP3-214ENST00000559718 PRR13Q9NZ81 148 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 C14orf166Q9Y224 244 aaKnown RBP8.42□□□□□ -1.06
USP3-214ENST00000559718 HERC2O95714 4834 aa8.42□□□□□ -1.06
USP3-214ENST00000559718 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 CEBPZOSA8MTT3 80 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 ZNF705EA8MWA4 302 aaPredicted RBP8.41□□□□□ -1.06
USP3-214ENST00000559718 RGS5O15539 181 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 SCGB2A1O75556 95 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 B3GALNT1O75752 331 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 HNRNPCP07910 306 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP3-214ENST00000559718 MIFP14174 115 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 C2orf83Q53S99 150 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 PSMG4Q5JS54 123 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
USP3-214ENST00000559718 Q6ZTC4 211 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 SLC24A4Q8NFF2 622 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 OR1S2Q8NGQ3 325 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 Q8WTZ3 238 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 NPIPB3Q92617 1050 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 HRH4Q9H3N8 390 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 GPR132Q9UNW8 380 aa8.41□□□□□ -1.06
USP3-214ENST00000559718 DNAH6Q9C0G6 4158 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 HELTA6NFD8 242 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 C11orf94C9JXX5 98 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 IL4P05112 153 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 SLC25A4P12235 298 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.06
USP3-214ENST00000559718 SPCS2Q15005 226 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 TMEM41BQ5BJD5 291 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 ZNF767PQ75MW2 155 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 OR4C16Q8NGL9 310 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
USP3-214ENST00000559718 C15orf40Q8WUR7 153 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 SMIM4Q8WVI0 70 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 TBC1D24Q9ULP9 559 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 CELA1Q9UNI1 258 aa8.4□□□□□ -1.06
USP3-214ENST00000559718 KRTAP9-6A0A140TA67 174 aa8.39□□□□□ -1.07
USP3-214ENST00000559718 DISC1C4P0D8 188 aa8.39□□□□□ -1.07
USP3-214ENST00000559718 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
USP3-214ENST00000559718 NPY1RP25929 384 aa8.39□□□□□ -1.07
USP3-214ENST00000559718 TCTAP57738 103 aa8.39□□□□□ -1.07
USP3-214ENST00000559718 SSBP1Q04837 148 aaKnown RBP8.39□□□□□ -1.07
USP3-214ENST00000559718 OR51S1Q8NGJ8 323 aa8.39□□□□□ -1.07
USP3-214ENST00000559718 ACY3Q96HD9 319 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms