RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 NPBWR1P48145 328 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 PATE2Q6UY27 113 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 MIR17HGQ75NE6 70 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 TMEM219Q86XT9 240 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 OR1L4Q8NGR5 311 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 PFDN5Q99471 154 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 MRPL32Q9BYC8 188 aaKnown RBP9.99□□□□□ -0.81
USP3-213ENST00000559711 TECRQ9NZ01 308 aaKnown RBP9.99□□□□□ -0.81
USP3-213ENST00000559711 DOPEY2Q9Y3R5 2298 aa9.99□□□□□ -0.81
USP3-213ENST00000559711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.98□□□□□ -0.811e-6■■■■□ 19.3
USP3-213ENST00000559711 TMEM250H0YL14 139 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 PAGE4O60829 102 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 CLN5O75503 358 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 FSHBP01225 129 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 GCHFRP30047 84 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 PLP1P60201 277 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 BTN1A1Q13410 526 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 FAM90A2PQ658T7 463 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 IQCF2Q8IXL9 164 aa9.98□□□□□ -0.81
USP3-213ENST00000559711 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
USP3-213ENST00000559711 ZNF48Q96MX3 618 aaPredicted RBP9.98□□□□□ -0.81
USP3-213ENST00000559711 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
USP3-213ENST00000559711 ATP6V0E1O15342 81 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 COX7A2P2O60397 106 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 C8orf88P0DMB2 117 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
USP3-213ENST00000559711 TAS2R45P59539 299 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 AKIRIN2Q53H80 203 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 PQLC2Q6ZP29 291 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 OR5T1Q8NG75 326 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 TXNDC17Q9BRA2 123 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 THYN1Q9P016 225 aa9.97□□□□□ -0.81
USP3-213ENST00000559711 LINC01548A6NM66 108 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 H3BUX3 64 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 DNASE2O00115 360 aaPredicted RBP9.96□□□□□ -0.81
USP3-213ENST00000559711 IGKV1-17P01599 117 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 HIST1H1BP16401 226 aaKnown RBP9.96□□□□□ -0.81
USP3-213ENST00000559711 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 SUN5Q8TC36 379 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 ZNF503Q96F45 646 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 FAM167A-AS1Q96KT0 104 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 ABCA1O95477 2261 aa9.96□□□□□ -0.81
USP3-213ENST00000559711 CREBBPQ92793 2442 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 C11orf94C9JXX5 98 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 H3BQ15 152 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 M0QZK8 103 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 CEBPGP53567 150 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 MFAP4P55083 255 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 C9orf139Q6ZV77 190 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 TMUB1Q9BVT8 246 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 GSX1Q9H4S2 264 aaPredicted RBP9.96□□□□□ -0.82
USP3-213ENST00000559711 TMEM167BQ9NRX6 74 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.82
USP3-213ENST00000559711 ZANQ9Y493 2812 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 CELSR1Q9NYQ6 3014 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 TRAV30A0A087WSZ9 112 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 SH2D7A6NKC9 451 aaPredicted RBP9.95□□□□□ -0.82
USP3-213ENST00000559711 HYPMO75409 117 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 NDUFB8O95169 186 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 FABP1P07148 127 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 PSG1P11464 419 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 FCGR2BP31994 310 aaPredicted RBP9.95□□□□□ -0.82
USP3-213ENST00000559711 TIGITQ495A1 244 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 C19orf54Q5BKX5 351 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 MORN5Q5VZ52 161 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 CYB5R2Q6BCY4 276 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 C16orf82Q7Z2V1 217 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 OR4F5Q8NH21 305 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 OR4F4Q96R69 305 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 NIPSNAP3BQ9BS92 247 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 DOK5Q9P104 306 aa9.95□□□□□ -0.82
USP3-213ENST00000559711 PUS1Q9Y606 427 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP3-213ENST00000559711 TRBV9A0A0B4J1U6 114 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 F8W735 103 aaPredicted RBP9.94□□□□□ -0.82
USP3-213ENST00000559711 PDE6DO43924 150 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 OR2J3O76001 311 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 RD3LP0DJH9 198 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 ORM2P19652 201 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 UBE2G2P60604 165 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 LY6EQ16553 131 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 DEFB112Q30KQ8 113 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 AWAT1Q58HT5 328 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 TXN2Q99757 166 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 SLC25A2Q9BXI2 301 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 ZNF355PQ9NSJ1 428 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 C21orf62Q9NYP8 219 aa9.94□□□□□ -0.82
USP3-213ENST00000559711 TRAV5A0A0B4J249 113 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 C7orf77A4D0Y5 90 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 G3V318 75 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 M0R036 132 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 OR7C2O60412 319 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 TOMM40O96008 361 aa9.93□□□□□ -0.82
USP3-213ENST00000559711 IGHG2P01859 326 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms