RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NUP155O75694 1391 aa0.09□□□□□ -2.39
CASC4-210ENST00000559550 TPM3P06753 285 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 CD79AP11912 226 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 ESRGQ1W209 222 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 ACOT6Q3I5F7 207 aaPredicted RBP0.09□□□□□ -2.4
CASC4-210ENST00000559550 LCA10Q71F78 164 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 GKN2Q86XP6 184 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 DCSTAMPQ9H295 470 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 NKIRAS1Q9NYS0 192 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 UBAP1Q9NZ09 502 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 MRPL27Q9P0M9 148 aaKnown RBP0.09□□□□□ -2.4
CASC4-210ENST00000559550 DENND4CQ5VZ89 1909 aa0.09□□□□□ -2.4
CASC4-210ENST00000559550 ROBO3Q96MS0 1386 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.08□□□□□ -2.4
CASC4-210ENST00000559550 OR4C46A6NHA9 309 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 KLF7O75840 302 aaPredicted RBP0.08□□□□□ -2.4
CASC4-210ENST00000559550 CRYZL1O95825 349 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 OR4E1P0C645 316 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 SMIM10L2AP0DMW4 78 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 SMIM10L2BP0DMW5 78 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 BRMS1LQ5PSV4 323 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 SPOPLQ6IQ16 392 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 MRPS26Q9BYN8 205 aaKnown RBP0.08□□□□□ -2.4
CASC4-210ENST00000559550 C20orf27Q9GZN8 174 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 TLNRD1Q9H1K6 362 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 NHP2Q9NX24 153 aaKnown RBP0.08□□□□□ -2.4
CASC4-210ENST00000559550 GUCA1BQ9UMX6 200 aa0.08□□□□□ -2.4
CASC4-210ENST00000559550 MAP3K5Q99683 1374 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 TRAV26-2A0A0B4J265 109 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 FAM236DA0A1B0GTK5 79 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 CCL16O15467 120 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 CHP2O43745 196 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 IFNA5P01569 189 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 FAM236CP0DP71 79 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 S100A4P26447 101 aaKnown RBP0.07□□□□□ -2.4
CASC4-210ENST00000559550 TPM4P67936 248 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 CIRBPQ14011 172 aaKnown RBP0.07□□□□□ -2.4
CASC4-210ENST00000559550 TRAPPC6BQ86SZ2 158 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 OR8D4Q8NGM9 314 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 WFDC5Q8TCV5 224 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 C4orf3Q8WVX3 66 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 ADAT3Q96EY9 351 aaPredicted RBP0.07□□□□□ -2.4
CASC4-210ENST00000559550 SNAPC4Q5SXM2 1469 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 DOCK5Q9H7D0 1870 aa0.07□□□□□ -2.4
CASC4-210ENST00000559550 CASP8AP2Q9UKL3 1982 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 NEO1Q92859 1461 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 A0A0D9SG42 100 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 TRBV6-4A0A1B0GX49 114 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 OR2T8A6NH00 312 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 NKX2-5P52952 324 aaPredicted RBP0.06□□□□□ -2.4
CASC4-210ENST00000559550 FAM74A1Q5RGS3 127 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 LINC00322Q6ZN03 302 aaPredicted RBP0.06□□□□□ -2.4
CASC4-210ENST00000559550 LINC00301Q8NCQ3 95 aa0.06□□□□□ -2.4
CASC4-210ENST00000559550 UTP11Q9Y3A2 253 aaKnown RBP0.06□□□□□ -2.4
CASC4-210ENST00000559550 CHCHD2Q9Y6H1 151 aaPredicted RBP0.06□□□□□ -2.4
CASC4-210ENST00000559550 ASH1LQ9NR48 2969 aaKnown RBP0.06□□□□□ -2.4
CASC4-210ENST00000559550 BDP1A6H8Y1 2624 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 TLCD2A6NGC4 264 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 PIRO00625 290 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 CETN3O15182 167 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 YPEL3P61236 119 aaPredicted RBP0.05□□□□□ -2.4
CASC4-210ENST00000559550 Q8IYB0 196 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 C12orf45Q8N5I9 185 aaPredicted RBP0.05□□□□□ -2.4
CASC4-210ENST00000559550 DDI1Q8WTU0 396 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 ITFG2Q969R8 447 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 C6orf62Q9GZU0 229 aaPredicted RBP0.05□□□□□ -2.4
CASC4-210ENST00000559550 BCL2L10Q9HD36 194 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 TMEM14CQ9P0S9 112 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 CYSLTR1Q9Y271 337 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 MYO3BQ8WXR4 1341 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 SBF1O95248 1867 aa0.05□□□□□ -2.4
CASC4-210ENST00000559550 ZNF106Q9H2Y7 1883 aaKnown RBP0.05□□□□□ -2.4
CASC4-210ENST00000559550 ECM29Q5VYK3 1845 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 MED1Q15648 1581 aaPredicted RBP0.04□□□□□ -2.4
CASC4-210ENST00000559550 A0A087X0T9 212 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 C7orf71A4D174 169 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 C1orf196B1AJZ1 125 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 ZNF682O95780 498 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 SULT1A1P50225 295 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 COTL1Q14019 142 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 TSNQ15631 228 aaKnown RBP0.04□□□□□ -2.4
CASC4-210ENST00000559550 KRTAP26-1Q6PEX3 210 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 OR11H6Q8NGC7 330 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 TEX47Q8TBZ9 253 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 DCUN1D1Q96GG9 259 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 C8orf76Q96K31 380 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 HIST1H2BLQ99880 126 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 C14orf132Q9NPU4 83 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 TAS2R7Q9NYW3 318 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 ALPK3Q96L96 1907 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 ZDBF2Q9HCK1 2354 aa0.04□□□□□ -2.4
CASC4-210ENST00000559550 IGHV1-58A0A0C4DH39 117 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 M0R378 163 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 GADD45GO95257 159 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 CNIH1O95406 144 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 AHSA1O95433 338 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 TTRP02766 147 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 IFNA16P05015 189 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 RBP1P09455 135 aa0.03□□□□□ -2.4
CASC4-210ENST00000559550 CASP1P29466 404 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms