RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 E5RGE8 158 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 WIPF1O43516 503 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 SCAF4O95104 1147 aaKnown RBP16.52■□□□□ 0.24
SNX1-206ENST00000559389 GIPP09681 153 aaPredicted RBP16.52■□□□□ 0.24
SNX1-206ENST00000559389 OR10J1P30954 320 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 DLK1P80370 383 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 ARL16Q0P5N6 197 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 OXLD1Q5BKU9 147 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 IL34Q6ZMJ4 242 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 ZNF600Q6ZNG1 722 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 TMEM252Q8N6L7 170 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 OR10P1Q8NGE3 313 aa16.52■□□□□ 0.24
SNX1-206ENST00000559389 TMEM213A2RRL7 107 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 G3V4G9 280 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 P2RY1P47900 373 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 TIGITQ495A1 244 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 RNF126Q9BV68 326 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 ELOVL1Q9BW60 279 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 TRRAPQ9Y4A5 3859 aa16.51■□□□□ 0.23
SNX1-206ENST00000559389 ZNF320A2RRD8 509 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 FNDC10F2Z333 226 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 SAP30O75446 220 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 CSN3P07498 182 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 Q6ZNX1 250 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 ZFAND3Q9H8U3 227 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 SIGLEC8Q9NYZ4 499 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 MBD2Q9UBB5 411 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 UFC1Q9Y3C8 167 aa16.5■□□□□ 0.23
SNX1-206ENST00000559389 IGKV1D-37A0A075B6S9 117 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 TRAV14DV4A0A0A6YYC5 116 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 C2orf70A6NJV1 201 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 CST7O76096 145 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 SULT1A1P50225 295 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 INSL3P51460 131 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 ELLP55199 621 aaPredicted RBP16.49■□□□□ 0.23
SNX1-206ENST00000559389 YPEL3P61236 119 aaPredicted RBP16.49■□□□□ 0.23
SNX1-206ENST00000559389 AKR1C1Q04828 323 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 STX12Q86Y82 276 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 THAP8Q8NA92 274 aa16.49■□□□□ 0.23
SNX1-206ENST00000559389 IGKV1OR2-108A0A075B7D4 117 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 ZFP92A6NM28 416 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 LYL1P12980 280 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 EDN2P20800 178 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 RAP2BP61225 183 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 SLC38A11Q08AI6 406 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 TOMM20LQ6UXN7 152 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 ADAMTSL5Q6ZMM2 481 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 GGACTQ9BVM4 153 aa16.48■□□□□ 0.23
SNX1-206ENST00000559389 DAZ1Q9NQZ3 744 aaKnown RBP16.48■□□□□ 0.23
SNX1-206ENST00000559389 PUS1Q9Y606 427 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNX1-206ENST00000559389 IGHV3OR16-8A0A075B7F1 116 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 SMCO3A2RU48 225 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 YIF1AO95070 293 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 TOMM40O96008 361 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 EWSR1Q01844 656 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNX1-206ENST00000559389 KPRPQ5T749 579 aaPredicted RBP16.47■□□□□ 0.23
SNX1-206ENST00000559389 TMEM144Q7Z5S9 345 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 TRGV9Q99603 122 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 C20orf24Q9BUV8 137 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 SLC25A31Q9H0C2 315 aa16.47■□□□□ 0.23
SNX1-206ENST00000559389 K7EMT4 169 aa16.46■□□□□ 0.23
SNX1-206ENST00000559389 FOLR2P14207 255 aa16.46■□□□□ 0.23
SNX1-206ENST00000559389 BEAN1Q3B7T3 259 aa16.46■□□□□ 0.23
SNX1-206ENST00000559389 TM4SF20Q53R12 229 aa16.46■□□□□ 0.23
SNX1-206ENST00000559389 TMEM217Q8N7C4 229 aa16.46■□□□□ 0.23
SNX1-206ENST00000559389 MARC2Q969Z3 335 aa16.46■□□□□ 0.23
SNX1-206ENST00000559389 CBLN1P23435 193 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 HBG1P69891 147 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 HBG2P69892 147 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 BAXQ07812 192 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 FGL1Q08830 312 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 VWC2Q2TAL6 325 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 THAP6Q8TBB0 222 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 CHAC2Q8WUX2 184 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 GINS3Q9BRX5 216 aa16.45■□□□□ 0.22
SNX1-206ENST00000559389 ZNF207O43670 478 aaKnown RBP16.44■□□□□ 0.22
SNX1-206ENST00000559389 IGLV1-51P01701 117 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 FABP1P07148 127 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 C8orf88P0DMB2 117 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 ZNF90Q03938 601 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 EGFEM1PQ0D2K5 195 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 LILRB2Q8N423 598 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 Q8WTZ3 238 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 TMEM147Q9BVK8 224 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 NPVFQ9HCQ7 196 aa16.44■□□□□ 0.22
SNX1-206ENST00000559389 RD3LP0DJH9 198 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 PSG1P11464 419 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 S100A11P31949 105 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 NHLH2Q02577 135 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 Q5BKY6 102 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 OR2T35Q8NGX2 323 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 DYNLRB2Q8TF09 96 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 UQCC1Q9NVA1 299 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 MRPL27Q9P0M9 148 aaKnown RBP16.43■□□□□ 0.22
SNX1-206ENST00000559389 MGAM2Q2M2H8 2515 aa16.43■□□□□ 0.22
SNX1-206ENST00000559389 G3V3Q6 166 aa16.42■□□□□ 0.22
SNX1-206ENST00000559389 IL4P05112 153 aa16.42■□□□□ 0.22
SNX1-206ENST00000559389 OR51G1Q8NGK1 321 aa16.42■□□□□ 0.22
SNX1-206ENST00000559389 LSM4Q9Y4Z0 139 aaKnown RBP16.42■□□□□ 0.22
SNX1-206ENST00000559389 HSPB11Q9Y547 144 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms