RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CD7P09564 240 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 PAX9P55771 341 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 GUCA2BQ16661 112 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 SPANXN5Q5MJ07 72 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 TMEM116Q8NCL8 245 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 OR2K2Q8NGT1 345 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 TECRQ9NZ01 308 aaKnown RBP14.06□□□□□ -0.16
CASC4-209ENST00000559222 IGHV7-4-1A0A0J9YVY3 117 aa14.05□□□□□ -0.16
CASC4-209ENST00000559222 K7EMT4 169 aa14.05□□□□□ -0.16
CASC4-209ENST00000559222 MBPP02686 304 aaPredicted RBP14.05□□□□□ -0.16
CASC4-209ENST00000559222 SLC25A4P12235 298 aa14.05□□□□□ -0.16
CASC4-209ENST00000559222 OR10J1P30954 320 aa14.05□□□□□ -0.16
CASC4-209ENST00000559222 MARC2Q969Z3 335 aa14.05□□□□□ -0.16
CASC4-209ENST00000559222 SMPXQ9UHP9 88 aa14.05□□□□□ -0.16
CASC4-209ENST00000559222 IGKV1D-37A0A075B6S9 117 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 IGHV3-66A0A0C4DH42 116 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 INMT-MINDY4F8WBC2 141 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 GAMTQ14353 236 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 NOXA1Q86UR1 476 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 LILRB2Q8N423 598 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 CIB3Q96Q77 187 aaPredicted RBP14.04□□□□□ -0.16
CASC4-209ENST00000559222 ASCL2Q99929 193 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 SMAD5-AS1Q9Y6J3 95 aa14.04□□□□□ -0.16
CASC4-209ENST00000559222 CHEK1O14757 476 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 DEFA1P59665 94 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 DEFA3P59666 94 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 ETFRF1Q6IPR1 90 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 OR1S2Q8NGQ3 325 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 ST8SIA2Q92186 375 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 RNF2Q99496 336 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 B9D2Q9BPU9 175 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 MARVELD1Q9BSK0 173 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 RHPN1-AS1Q9BWJ2 59 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 PSENENQ9NZ42 101 aa14.03□□□□□ -0.16
CASC4-209ENST00000559222 IGKV1OR2-108A0A075B7D4 117 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 C5orf51A6NDU8 294 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 PMS2P5A8MQ11 134 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 SIX6O95475 246 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 IGHV4-30-4P0DP06 118 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 CD81P60033 236 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 RAB11AP62491 216 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 C11orf1Q9H5F2 150 aa14.02□□□□□ -0.17
CASC4-209ENST00000559222 STRAPQ9Y3F4 350 aaKnown RBP14.02□□□□□ -0.17
CASC4-209ENST00000559222 COL7A1Q02388 2944 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 TRAV14DV4A0A0A6YYC5 116 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 K7EPK0 472 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 FRMD6-AS1P0C7T7 363 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 GPX4P36969 197 aaPredicted RBP14.01□□□□□ -0.17
CASC4-209ENST00000559222 ATP5IP56385 69 aaPredicted RBP14.01□□□□□ -0.17
CASC4-209ENST00000559222 ZNF90Q03938 601 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 SLC35E1Q96K37 410 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 SMIM8Q96KF7 97 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 NEURL2Q9BR09 285 aa14.01□□□□□ -0.17
CASC4-209ENST00000559222 LSM5Q9Y4Y9 91 aaKnown RBP14.01□□□□□ -0.17
CASC4-209ENST00000559222 HUWE1Q7Z6Z7 4374 aaKnown RBP14.01□□□□□ -0.17
CASC4-209ENST00000559222 TRAV30A0A087WSZ9 112 aa14□□□□□ -0.17
CASC4-209ENST00000559222 GOSR2O14653 212 aa14□□□□□ -0.17
CASC4-209ENST00000559222 METTL15P1P0C7V9 234 aa14□□□□□ -0.17
CASC4-209ENST00000559222 IL15RAQ13261 267 aa14□□□□□ -0.17
CASC4-209ENST00000559222 USF2Q15853 346 aaPredicted RBP14□□□□□ -0.17
CASC4-209ENST00000559222 OR8G2PQ6IF36 304 aa14□□□□□ -0.17
CASC4-209ENST00000559222 ACOT7LQ6ZUV0 252 aa14□□□□□ -0.17
CASC4-209ENST00000559222 C2orf50Q96LR7 162 aa14□□□□□ -0.17
CASC4-209ENST00000559222 C19orf73Q9NVV2 129 aa14□□□□□ -0.17
CASC4-209ENST00000559222 IGKV3-7A0A075B6H7 116 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 C7orf66A4D0T2 115 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 TOMM40O96008 361 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 PSG1P11464 419 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 YPEL3P61236 119 aaPredicted RBP13.99□□□□□ -0.17
CASC4-209ENST00000559222 ARL16Q0P5N6 197 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 TMEM14EPQ6UXP3 125 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 GSG1LQ6UXU4 331 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 RBPMS2Q6ZRY4 209 aaKnown RBP13.99□□□□□ -0.17
CASC4-209ENST00000559222 GTSCR1Q86UQ5 136 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 SBSPONQ8IVN8 264 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 DEFB125Q8N687 156 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 GINS3Q9BRX5 216 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 VSIRQ9H7M9 311 aa13.99□□□□□ -0.17
CASC4-209ENST00000559222 GPN1Q9HCN4 374 aaPredicted RBP13.99□□□□□ -0.17
CASC4-209ENST00000559222 ZFP92A6NM28 416 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 SNRPGP15A8MWD9 76 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 PRAF2O60831 178 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 IL4P05112 153 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 RPP30P78346 268 aaKnown RBP13.98□□□□□ -0.17
CASC4-209ENST00000559222 RAB32Q13637 225 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 FAM90A2PQ658T7 463 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 RAB40CQ96S21 281 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 UBQLN2Q9UHD9 624 aa13.98□□□□□ -0.17
CASC4-209ENST00000559222 TRAV25A0A0B4J276 109 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 TSPAN4O14817 238 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 CRYBB3P26998 211 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 S100A10P60903 97 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 RRAS2P62070 204 aaPredicted RBP13.97□□□□□ -0.17
CASC4-209ENST00000559222 DCTN2Q13561 401 aaKnown RBP13.97□□□□□ -0.17
CASC4-209ENST00000559222 OR2F1Q13607 317 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 TMEM182Q6ZP80 229 aaPredicted RBP13.97□□□□□ -0.17
CASC4-209ENST00000559222 TCF24Q7RTU0 167 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 THAP8Q8NA92 274 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 OR51G1Q8NGK1 321 aa13.97□□□□□ -0.17
CASC4-209ENST00000559222 Q8WTZ3 238 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 284.1 ms