RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 NRN1LQ496H8 165 aa5.91□□□□□ -1.46
USP3-210ENST00000559192 WFDC3Q8IUB2 231 aa5.91□□□□□ -1.46
USP3-210ENST00000559192 METRNQ9UJH8 293 aa5.91□□□□□ -1.46
USP3-210ENST00000559192 SAA2-SAA4A0A096LPE2 208 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 MUC21A0A0G2JKD1 596 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 MUC21A0A140T8X8 626 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 FAM181BA6NEQ2 426 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 SAA2P0DJI9 122 aaPredicted RBP5.9□□□□□ -1.46
USP3-210ENST00000559192 MUC21Q5SSG8 566 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 Q6P435 159 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 FBXL7Q9UJT9 491 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 IGKV3-7A0A075B6H7 116 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 LOC102723996A0A087X1L8 192 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 C3orf79P0CE67 100 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 IGHV1-2P23083 117 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 NTF4P34130 210 aa5.9□□□□□ -1.46
USP3-210ENST00000559192 MRPL32Q9BYC8 188 aaKnown RBP5.9□□□□□ -1.46
USP3-210ENST00000559192 TRBV20OR9-2A0A075B6H5 130 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 TRAV17A0A0B4J275 112 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 PLA2G5P39877 138 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 ATP5IP56385 69 aaPredicted RBP5.9□□□□□ -1.47
USP3-210ENST00000559192 TMPRSS3P57727 454 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 ZNF714Q96N38 554 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 IFI27L2Q9H2X8 130 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 C21orf140B9A014 251 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 F2Z2F3 143 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 ATP5LO75964 103 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 DUTP33316 252 aaKnown RBP5.9□□□□□ -1.47
USP3-210ENST00000559192 B3GALT5-AS1P59052 145 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 Q6ZS49 121 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 GOLT1AQ6ZVE7 132 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 C1orf210Q8IVY1 113 aa5.9□□□□□ -1.47
USP3-210ENST00000559192 C15orf61A6NNL5 157 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 C15orf62A8K5M9 175 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 NDUFA3O95167 84 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 IGLV3-1P01715 115 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 RPS20P60866 119 aaKnown RBP5.89□□□□□ -1.47
USP3-210ENST00000559192 RBPJQ06330 500 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 MORN2Q502X0 79 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 SFXN3Q9BWM7 321 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 CA7P43166 264 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 Q0VFX4 171 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 WDR82Q6UXN9 313 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 IQCF6A8MYZ5 107 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 ADAMTSL5Q6ZMM2 481 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
USP3-210ENST00000559192 DNAJC13O75165 2243 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 TRBV7-9A0A0J9YWB2 115 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 hDV102S1A0JD36 115 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 C1orf174Q8IYL3 243 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 OSTCQ9NRP0 149 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 EPDR1Q9UM22 224 aa5.89□□□□□ -1.47
USP3-210ENST00000559192 CECR9P0C854 216 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 FOXF2Q12947 444 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 MPV17L2Q567V2 206 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 TMEM78Q5T7P6 136 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 DTX1Q86Y01 620 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 SSC4DQ8WTU2 575 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 MCRIP2Q9BUT9 160 aaKnown RBP5.88□□□□□ -1.47
USP3-210ENST00000559192 BPTFQ12830 3046 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 A0A1W2PS18 150 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 PRSS47A8MTI9 375 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 GPX1P07203 203 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 TSPOP30536 169 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 ZNF415Q09FC8 603 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 OR9G1Q8NH87 305 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 KIR2DL4Q99706 377 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 C19orf24Q9BVV8 132 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 SCNM1Q9BWG6 230 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 PRRG2O14669 202 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 NUPR1O60356 82 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
USP3-210ENST00000559192 PAPPA-AS1Q5QFB9 102 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 FAM216BQ8N7L0 139 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 RAB1CQ92928 201 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 ZNF503-AS2A6NEH8 195 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 UBE2L6O14933 153 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 SAA1P0DJI8 122 aaPredicted RBP5.88□□□□□ -1.47
USP3-210ENST00000559192 LOXL3P58215 753 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 TSKUQ8WUA8 353 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 GPR82Q96P67 336 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 SCGB3A1Q96QR1 104 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 MRPL20Q9BYC9 149 aaKnown RBP5.88□□□□□ -1.47
USP3-210ENST00000559192 RAB1BQ9H0U4 201 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 PHLDA3Q9Y5J5 127 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 TSSC4Q9Y5U2 329 aaPredicted RBP5.88□□□□□ -1.47
USP3-210ENST00000559192 INSIG2Q9Y5U4 225 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 TRBV6-6A0A0A6YYG2 114 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 TRAV2A0A0B4J234 112 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 IGHV1-69-2A0A0G2JMI3 117 aa5.88□□□□□ -1.47
USP3-210ENST00000559192 PRB3Q04118 309 aaPredicted RBP5.88□□□□□ -1.47
USP3-210ENST00000559192 ETV2O00321 342 aaPredicted RBP5.87□□□□□ -1.47
USP3-210ENST00000559192 RPL27AP46776 148 aaKnown RBP5.87□□□□□ -1.47
USP3-210ENST00000559192 ATXN8Q156A1 80 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 A0A1B0GWJ7 208 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 ZNF815PA8K554 130 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 KLF12Q9Y4X4 402 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 S4R3C0 116 aa5.87□□□□□ -1.47
USP3-210ENST00000559192 LGALS7P47929 136 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms