RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 ARPC5O15511 151 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 PFDN1O60925 122 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 GGCTO75223 188 aaKnown RBP5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 TRBV12-3P01733 135 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 FABP1P07148 127 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 ZP3P21754 424 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 OR10J1P30954 320 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 MYCNOSP40205 109 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 AP2S1P53680 142 aaPredicted RBP5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 NHLH2Q02577 135 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 RELQ04864 619 aaPredicted RBP5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 ARL16Q0P5N6 197 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 GAMTQ14353 236 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 CLINT1Q14677 625 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 MLANAQ16655 118 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 RPEL1Q2QD12 228 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 HAPLN4Q86UW8 402 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 TMEM116Q8NCL8 245 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 RAX2Q96IS3 184 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 AQP10Q96PS8 301 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 DUX3Q96PT4 197 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 SMIM3Q9BZL3 60 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 NPVFQ9HCQ7 196 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 MRPL36Q9P0J6 103 aaKnown RBP5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 TNFSF18Q9UNG2 199 aa5.09□□□□□ -1.59
CHRNA3-204ENST00000559002 HMSDA8MTL9 139 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 F8W735 103 aaPredicted RBP5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 DFFBO76075 338 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 YIF1AO95070 293 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 OR2C1O95371 312 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 IFNA5P01569 189 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 C1QBP02746 253 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 CTSGP08311 255 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 IGLC1P0CG04 106 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 HOXD3P31249 432 aaPredicted RBP5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 SLURP1P55000 103 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 OR2F1Q13607 317 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 RAB31Q13636 194 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 TIGITQ495A1 244 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 ZFP69Q49AA0 526 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 FAM106AQ4KMX7 169 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 TEPPQ6URK8 271 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF600Q6ZNG1 722 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 TMEM144Q7Z5S9 345 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 OR11H4Q8NGC9 324 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 SPATA3Q8NHX4 192 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 ATP5SQ99766 215 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 NEURL2Q9BR09 285 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 CHRDL1Q9BU40 450 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 MFFQ9GZY8 342 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 FBXL17Q9UF56 701 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 PKD1L1Q8TDX9 2849 aa5.08□□□□□ -1.6
CHRNA3-204ENST00000559002 TRRAPQ9Y4A5 3859 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 CMYA5Q8N3K9 4069 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 IGHV3-35A0A0C4DH35 117 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF320A2RRD8 509 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 RNF222A6NCQ9 220 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 NDUFA4O00483 81 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 TSPAN15O95858 294 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 FGF7P21781 194 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 ADMP35318 185 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 CAMLGP49069 296 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 EIF2B2P49770 351 aaKnown RBP5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 YPEL3P61236 119 aaPredicted RBP5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 FHL3Q13643 280 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF266Q14584 549 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF345Q14585 488 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 VWC2Q2TAL6 325 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 BTNL8Q6UX41 500 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 TREML4Q6UXN2 200 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 C1QL4Q86Z23 238 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF709Q8N972 641 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 THAP8Q8NA92 274 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 BPIFCQ8NFQ6 507 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 Q8WTZ3 238 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 HYLS1Q96M11 299 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 TRGV9Q99603 122 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 C20orf24Q9BUV8 137 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
CHRNA3-204ENST00000559002 MGAM2Q2M2H8 2515 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 IGKV1D-37A0A075B6S9 117 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 IGKV1OR2-108A0A075B7D4 117 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 BORCS7-ASMTA0A0B4J1R7 106 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 A0A0D9SG52 128 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 KANTRA0A1W2PQU2 76 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 C17orf112F2Z3M2 114 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 OVOL1O14753 267 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 TAAR5O14804 337 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 AGPAT2O15120 278 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 MPDU1O75352 247 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 TOMM40O96008 361 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 CFDP00746 253 aaPredicted RBP5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 IGKV1-17P01599 117 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 RD3LP0DJH9 198 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 CD33P20138 364 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 SYNJ2BPP57105 145 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 SELENOTP62341 195 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 ZNF90Q03938 601 aa5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 KLF5Q13887 457 aaPredicted RBP5.06□□□□□ -1.6
CHRNA3-204ENST00000559002 CYP2G1PQ6ZSU1 146 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms