RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NXPH3O95157 252 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 ATF4P18848 351 aaPredicted RBP12.52□□□□□ -0.41
LRRC28-210ENST00000558879 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
LRRC28-210ENST00000558879 CCR6P51684 374 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 RND2P52198 227 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 EWSR1Q01844 656 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRRC28-210ENST00000558879 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 TIGITQ495A1 244 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 OR1S2Q8NGQ3 325 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 DEDD2Q8WXF8 326 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 METTL26Q96S19 204 aa12.52□□□□□ -0.41
LRRC28-210ENST00000558879 IGHV3-66A0A0C4DH42 116 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 AKR1C4P17516 323 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 NPPCP23582 126 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 SRPXP78539 464 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 LYZL2Q7Z4W2 148 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 U3KQE9 123 aa12.51□□□□□ -0.41
LRRC28-210ENST00000558879 DUXBA0A1W2PPF3 345 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 A0A1W2PS18 150 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 K7EQG2 157 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 ANXA3P12429 323 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 P2RY1P47900 373 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 AP3S2P59780 193 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 YPEL3P61236 119 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-210ENST00000558879 LGI3Q8N145 548 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 TOMM5Q8N4H5 51 aa12.5□□□□□ -0.41
LRRC28-210ENST00000558879 JTBO76095 146 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 OR10J1P30954 320 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 PYDC2Q56P42 97 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 TMEM128Q5BJH2 165 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 NOXA1Q86UR1 476 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 LRTM2Q8N967 370 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 RBKSQ9H477 322 aa12.49□□□□□ -0.41
LRRC28-210ENST00000558879 PLECQ15149 4684 aaKnown RBP12.49□□□□□ -0.41
LRRC28-210ENST00000558879 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 ZNF701M0R085 212 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-210ENST00000558879 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-210ENST00000558879 PITX3O75364 302 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 DEFB131AP59861 70 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 RBMS2Q15434 407 aaKnown RBP12.48□□□□□ -0.41
LRRC28-210ENST00000558879 USF2Q15853 346 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-210ENST00000558879 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 GLMPQ8WWB7 406 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 GRAMD2BQ96HH9 432 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 U3KQ87 197 aa12.48□□□□□ -0.41
LRRC28-210ENST00000558879 CCDC160A6NGH7 325 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 MPTX1A8MV57 137 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 TOMM40O96008 361 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 HNRNPCP07910 306 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRRC28-210ENST00000558879 S100A5P33763 92 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 LEMD1Q68G75 181 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 TMED4Q7Z7H5 227 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 STXBP6Q8NFX7 210 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 SLC25A21Q9BQT8 299 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-210ENST00000558879 RABAC1Q9UI14 185 aa12.47□□□□□ -0.41
LRRC28-210ENST00000558879 IFNA10P01566 189 aa12.46□□□□□ -0.41
LRRC28-210ENST00000558879 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.41
LRRC28-210ENST00000558879 C16orf54Q6UWD8 224 aa12.46□□□□□ -0.41
LRRC28-210ENST00000558879 Q8WTZ3 238 aa12.46□□□□□ -0.41
LRRC28-210ENST00000558879 NARS2Q96I59 477 aaKnown RBP12.46□□□□□ -0.41
LRRC28-210ENST00000558879 SRRQ9GZT4 340 aa12.46□□□□□ -0.41
LRRC28-210ENST00000558879 NUPR2A6NF83 97 aa12.45□□□□□ -0.42
LRRC28-210ENST00000558879 IL4P05112 153 aa12.45□□□□□ -0.42
LRRC28-210ENST00000558879 SLC25A6P12236 298 aa12.45□□□□□ -0.42
LRRC28-210ENST00000558879 ATP5IP56385 69 aaPredicted RBP12.45□□□□□ -0.42
LRRC28-210ENST00000558879 TRPT1Q86TN4 253 aaKnown RBP12.45□□□□□ -0.42
LRRC28-210ENST00000558879 OR1S1Q8NH92 325 aa12.45□□□□□ -0.42
LRRC28-210ENST00000558879 ACY3Q96HD9 319 aa12.45□□□□□ -0.42
LRRC28-210ENST00000558879 C11orf68Q9H3H3 251 aaKnown RBP12.45□□□□□ -0.42
LRRC28-210ENST00000558879 FAM90A26D6RGX4 464 aa12.44□□□□□ -0.42
LRRC28-210ENST00000558879 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
LRRC28-210ENST00000558879 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
LRRC28-210ENST00000558879 PPP1R1AQ13522 171 aa12.44□□□□□ -0.42
LRRC28-210ENST00000558879 PMS2P11Q13670 270 aa12.44□□□□□ -0.42
LRRC28-210ENST00000558879 TMEM217Q8N7C4 229 aa12.44□□□□□ -0.42
LRRC28-210ENST00000558879 IGKV1D-37A0A075B6S9 117 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 CXorf65A6NEN9 183 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 HELTA6NFD8 242 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 BUB3O43684 328 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 SFT2D2O95562 160 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 PSG1P11464 419 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 VAMP1P23763 118 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 CENPSQ8N2Z9 138 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 LINC00476Q8WZB0 136 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 RARRES2Q99969 163 aa12.43□□□□□ -0.42
LRRC28-210ENST00000558879 GIG44P09565 113 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-210ENST00000558879 RD3LP0DJH9 198 aa12.42□□□□□ -0.42
LRRC28-210ENST00000558879 GPX4P36969 197 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-210ENST00000558879 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
LRRC28-210ENST00000558879 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
LRRC28-210ENST00000558879 GAMTQ14353 236 aa12.42□□□□□ -0.42
LRRC28-210ENST00000558879 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms