RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 HINT1P49773 126 aaPredicted RBP12.62□□□□□ -0.39
AP4E1-202ENST00000558439 ATP5IP56385 69 aaPredicted RBP12.62□□□□□ -0.39
AP4E1-202ENST00000558439 BRWD1-AS2P59051 145 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 Q6ZS92 163 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 SRSF12Q8WXF0 261 aaKnown RBP12.62□□□□□ -0.39
AP4E1-202ENST00000558439 PRO3102Q9H379 93 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 NRN1Q9NPD7 142 aa12.62□□□□□ -0.39
AP4E1-202ENST00000558439 MUC21A0A0G2JKD1 596 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 MUC21A0A140T8X8 626 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.61□□□□□ -0.39
AP4E1-202ENST00000558439 IFITM10A6NMD0 228 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 TMEM30BQ3MIR4 351 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 TMEM14BQ9NUH8 114 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 ZNF257Q9Y2Q1 563 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 A0A1W2PRE2 83 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 WNT2P09544 360 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 RNASE2P10153 161 aaKnown RBP12.61□□□□□ -0.39
AP4E1-202ENST00000558439 APOBEC3AP31941 199 aaPredicted RBP12.61□□□□□ -0.39
AP4E1-202ENST00000558439 DIAPH2-AS1Q14236 149 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 PMS2P5A8MQ11 134 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 PROP1O75360 226 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 AREGP15514 252 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 ST6GALNAC3Q8NDV1 305 aa12.61□□□□□ -0.39
AP4E1-202ENST00000558439 EXPH5Q8NEV8 1989 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 H0YJW9 148 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 LY6HO94772 140 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 IL4P05112 153 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 NDFIP1Q9BT67 221 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 SCNM1Q9BWG6 230 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 THYN1Q9P016 225 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 ARL3P36405 182 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 BPIFA4PQ86YQ2 179 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 PTPRQQ9UMZ3 2332 aa12.6□□□□□ -0.39
AP4E1-202ENST00000558439 TRBV9A0A0B4J1U6 114 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 TCRBV4S1A1TA0A5B7 111 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 TMEM178BH3BS89 294 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 CLEC3BP05452 202 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 C19orf35Q6ZS72 473 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 CENPVQ7Z7K6 275 aaPredicted RBP12.59□□□□□ -0.39
AP4E1-202ENST00000558439 Q8TCH9 128 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
AP4E1-202ENST00000558439 OSTCQ9NRP0 149 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 NCKAP5O14513 1909 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 IGHV3OR16-13A0A075B7E8 117 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 IGHV3-74A0A0B4J1X5 117 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 OR5AL1P0C617 328 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 C5orf17Q8NAS9 161 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 OR4B1Q8NGF8 309 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 J3KRW8 73 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 CORTO00230 105 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 ORM1P02763 201 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 AARDQ4LEZ3 155 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 SMIM15Q7Z3B0 74 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 TAS2R60P59551 318 aa12.59□□□□□ -0.39
AP4E1-202ENST00000558439 B9A039 149 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 NHLH1Q02575 133 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 RNF151Q2KHN1 245 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 PRR30Q53SZ7 412 aaPredicted RBP12.58□□□□□ -0.4
AP4E1-202ENST00000558439 IGKV3-7A0A075B6H7 116 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 M0QZK8 103 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.58□□□□□ -0.4
AP4E1-202ENST00000558439 CA7P43166 264 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 ST6GALNAC6Q969X2 333 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 Q9H3A6 140 aa12.58□□□□□ -0.4
AP4E1-202ENST00000558439 WDFY4Q6ZS81 3184 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 IZUMO1RA6ND01 250 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 OR8A1Q8NGG7 326 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 CGB1A6NKQ9 187 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 RIGQ13278 110 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 NUDT10Q8NFP7 164 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 NUDT11Q96G61 164 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 UBTD1Q9HAC8 227 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 EPDR1Q9UM22 224 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 C9JCJ5 164 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 LEPROTL1O95214 131 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 COL8A2P25067 703 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 PTTG1IPP53801 180 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 GRAMD2BQ96HH9 432 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 GPR82Q96P67 336 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 ASCL2Q99929 193 aa12.57□□□□□ -0.4
AP4E1-202ENST00000558439 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 KLF17Q5JT82 389 aaPredicted RBP12.56□□□□□ -0.4
AP4E1-202ENST00000558439 UNQ6494/PRO21346Q6UXR6 183 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 SEM1Q6ZVN7 128 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 TMEM191AQ9H0A3 160 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 CACNA1AO00555 2505 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 GGTLC3B5MD39 225 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 LIPFP07098 398 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 S100A7P31151 101 aa12.56□□□□□ -0.4
AP4E1-202ENST00000558439 LBHQ53QV2 105 aaPredicted RBP12.56□□□□□ -0.4
AP4E1-202ENST00000558439 C11orf42Q8N5U0 333 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms