RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 IGHV7-4-1A0A0J9YVY3 117 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 FAM240BA0A1B0GVZ2 78 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 OR11H12B2RN74 326 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 SYNGR2O43760 224 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 BTCP35070 178 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 YPEL3P61236 119 aaPredicted RBP6.38□□□□□ -1.39
TPM1-213ENST00000558400 ID3Q02535 119 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 ZNF846Q147U1 533 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 MLANAQ16655 118 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 BTNL8Q6UX41 500 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 TOMM20LQ6UXN7 152 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 OR52B4Q8NGK2 314 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 MITD1Q8WV92 249 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 WDR89Q96FK6 387 aaPredicted RBP6.38□□□□□ -1.39
TPM1-213ENST00000558400 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
TPM1-213ENST00000558400 FAM110AQ9BQ89 295 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 RHPN1-AS1Q9BWJ2 59 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 PFDN2Q9UHV9 154 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 FLVCR2Q9UPI3 526 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 PUS1Q9Y606 427 aaKnown RBP eCLIP6.38□□□□□ -1.39
TPM1-213ENST00000558400 U3KQK5 164 aa6.38□□□□□ -1.39
TPM1-213ENST00000558400 OR4C46A6NHA9 309 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 WRBO00258 174 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 CHEK1O14757 476 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 SCAF4O95104 1147 aaKnown RBP6.37□□□□□ -1.39
TPM1-213ENST00000558400 NXPH3O95157 252 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 FABP1P07148 127 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 ANXA7P20073 488 aaKnown RBP6.37□□□□□ -1.39
TPM1-213ENST00000558400 OR10J1P30954 320 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 NKX2-1P43699 371 aaPredicted RBP6.37□□□□□ -1.39
TPM1-213ENST00000558400 RND2P52198 227 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 SBSPONQ8IVN8 264 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 METTL26Q96S19 204 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 C20orf85Q9H1P6 137 aa6.37□□□□□ -1.39
TPM1-213ENST00000558400 IGHV3OR16-8A0A075B7F1 116 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 ZNF207O43670 478 aaKnown RBP6.36□□□□□ -1.39
TPM1-213ENST00000558400 IGKV1-17P01599 117 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 CD7P09564 240 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 H2AFB2P0C5Z0 115 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 IGLC1P0CG04 106 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 RD3LP0DJH9 198 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 EDN2P20800 178 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 CRYBB3P26998 211 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 EIF2B2P49770 351 aaKnown RBP6.36□□□□□ -1.39
TPM1-213ENST00000558400 AP2S1P53680 142 aaPredicted RBP6.36□□□□□ -1.39
TPM1-213ENST00000558400 ASAH1Q13510 395 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 C11orf87Q6NUJ2 197 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 TMEM170AQ8WVE7 144 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 NPIPB3Q92617 1050 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 GRAMD2BQ96HH9 432 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 SLC35E1Q96K37 410 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 WWC2-AS2Q96NR7 200 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 ASCL2Q99929 193 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 VSIRQ9H7M9 311 aa6.36□□□□□ -1.39
TPM1-213ENST00000558400 STRAPQ9Y3F4 350 aaKnown RBP6.36□□□□□ -1.39
TPM1-213ENST00000558400 TRAV6A0A075B6T7 132 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 SNRPGP15A8MWD9 76 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 ADAP1O75689 374 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 UPK1BO75841 260 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 CFDP00746 253 aaPredicted RBP6.35□□□□□ -1.39
TPM1-213ENST00000558400 TAS2R30P59541 319 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 HAGHQ16775 308 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 IAH1Q2TAA2 248 aaPredicted RBP6.35□□□□□ -1.39
TPM1-213ENST00000558400 TIGITQ495A1 244 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 SPANXN5Q5MJ07 72 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 FAM90A2PQ658T7 463 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 LINC00322Q6ZN03 302 aaPredicted RBP6.35□□□□□ -1.39
TPM1-213ENST00000558400 ZNF431Q8TF32 576 aaPredicted RBP6.35□□□□□ -1.39
TPM1-213ENST00000558400 ACY3Q96HD9 319 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 SMIM8Q96KF7 97 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 RAB40CQ96S21 281 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 RNF2Q99496 336 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 TM2D3Q9BRN9 247 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 MAGT1Q9H0U3 335 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 NUDT15Q9NV35 164 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
TPM1-213ENST00000558400 PAIP2BQ9ULR5 123 aaKnown RBP6.35□□□□□ -1.39
TPM1-213ENST00000558400 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
TPM1-213ENST00000558400 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
TPM1-213ENST00000558400 TRAV2A0A0B4J234 112 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 HELTA6NFD8 242 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 ZFP92A6NM28 416 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 DNASE2O00115 360 aaPredicted RBP6.34□□□□□ -1.39
TPM1-213ENST00000558400 TOMM40O96008 361 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 IL5P05113 134 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 IAPPP10997 89 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 S100A7P31151 101 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 NUP62P37198 522 aaPredicted RBP6.34□□□□□ -1.39
TPM1-213ENST00000558400 DEFA1P59665 94 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 DEFA3P59666 94 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 RPL11P62913 178 aaKnown RBP6.34□□□□□ -1.39
TPM1-213ENST00000558400 GAMTQ14353 236 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 TCF24Q7RTU0 167 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 C12orf45Q8N5I9 185 aaPredicted RBP6.34□□□□□ -1.39
TPM1-213ENST00000558400 DEFB125Q8N687 156 aa6.34□□□□□ -1.39
TPM1-213ENST00000558400 OR51G1Q8NGK1 321 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms