RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 DAZ1Q9NQZ3 744 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 DAZ3Q9NR90 486 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 NUFIP1Q9UHK0 495 aaKnown RBP2.95□□□□□ -1.94
LRRC28-205ENST00000558248 PXMP4Q9Y6I8 212 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 WNK1Q9H4A3 2382 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 SCN2AQ99250 2005 aa2.95□□□□□ -1.94
LRRC28-205ENST00000558248 SVEP1Q4LDE5 3571 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 TMEM72A0PK05 275 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 OR5H1A6NKK0 313 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 SIGLEC16A6NMB1 481 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 OR4C45A6NMZ5 311 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 DEGS1O15121 323 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 PIAS1O75925 651 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 OR2J2O76002 312 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 DBIP07108 87 aaKnown RBP2.94□□□□□ -1.94
LRRC28-205ENST00000558248 C8GP07360 202 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 PSG2P11465 335 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 S100PP25815 95 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 GABRA3P34903 492 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 MDH2P40926 338 aaKnown RBP2.94□□□□□ -1.94
LRRC28-205ENST00000558248 GABARAPL2P60520 117 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 NCALDP61601 193 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 SNRPD2P62316 118 aaKnown RBP2.94□□□□□ -1.94
LRRC28-205ENST00000558248 RAP1AP62834 184 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 MPPED2Q15777 294 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 KCNJ8Q15842 424 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 SCGB2B2Q4G0G5 96 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 IBA57Q5T440 356 aaKnown RBP2.94□□□□□ -1.94
LRRC28-205ENST00000558248 ZFAND6Q6FIF0 208 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 DNAJC24Q6P3W2 148 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 AGTRAPQ6RW13 159 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 LYPD2Q6UXB3 125 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 IDO2Q6ZQW0 420 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 LRRC18Q8N456 261 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.94□□□□□ -1.94
LRRC28-205ENST00000558248 C3orf56Q8N813 242 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF615Q8N8J6 731 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 TMEM75Q8N9X5 138 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 LINC00301Q8NCQ3 95 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 OR8B12Q8NGG6 310 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 OR9A2Q8NGT5 310 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 OR1L1Q8NH94 360 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 GTSF1Q8WW33 167 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 DNAJC9Q8WXX5 260 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 GALMQ96C23 342 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 PYGO2Q9BRQ0 406 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 COMMD5Q9GZQ3 224 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 TMEM126AQ9H061 195 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 GTSF1LQ9H1H1 148 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 VCXQ9H320 206 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 MED29Q9NX70 200 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 LAMTOR3Q9UHA4 124 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 SMAD5-AS1Q9Y6J3 95 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 KIAA1549Q9HCM3 1950 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 FREM1Q5H8C1 2179 aa2.94□□□□□ -1.94
LRRC28-205ENST00000558248 ANK2Q01484 3957 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 NOTCH3Q9UM47 2321 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 TENM1Q9UKZ4 2725 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 MED12Q93074 2177 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 TMED7-TICAM2A0A0A6YYA0 188 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 LINC00587B1AMM8 73 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 TPST1O60507 370 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 DEDDO75618 318 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 CRISP2P16562 243 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 CCL1P22362 96 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 GATA2P23769 480 aaPredicted RBP2.93□□□□□ -1.94
LRRC28-205ENST00000558248 IMPA1P29218 277 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 INPP1P49441 399 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF83P51522 516 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 EMP1P54849 157 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 TIMM50Q3ZCQ8 353 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 C6orf52Q5T4I8 152 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 FA2HQ7L5A8 372 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 TCF24Q7RTU0 167 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 SLC25A42Q86VD7 318 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 LRRC28Q86X40 367 aaPredicted RBP2.93□□□□□ -1.94
LRRC28-205ENST00000558248 OR2T27Q8NH04 317 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 NAT14Q8WUY8 206 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 DCUN1D4Q92564 292 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 GPR146Q96CH1 333 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 STARD4Q96DR4 205 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 MS4A6EQ96DS6 147 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 ABHD14BQ96IU4 210 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 FOPNLQ96NB1 174 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 LYSMD1Q96S90 227 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 NMNAT3Q96T66 252 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 VPS25Q9BRG1 176 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 TMEM147Q9BVK8 224 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 CHST6Q9GZX3 395 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF331Q9NQX6 463 aaPredicted RBP2.93□□□□□ -1.94
LRRC28-205ENST00000558248 ZNF581Q9P0T4 197 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 COPZ2Q9P299 210 aa2.93□□□□□ -1.94
LRRC28-205ENST00000558248 ANK3Q12955 4377 aaKnown RBP2.93□□□□□ -1.94
LRRC28-205ENST00000558248 YLPM1P49750 1951 aaKnown RBP2.92□□□□□ -1.94
LRRC28-205ENST00000558248 SNRNP200O75643 2136 aaKnown RBP2.92□□□□□ -1.94
LRRC28-205ENST00000558248 IGLV3-12A0A075B6K2 115 aa2.92□□□□□ -1.94
LRRC28-205ENST00000558248 hCG_1818297A0A087WSY0 165 aa2.92□□□□□ -1.94
LRRC28-205ENST00000558248 IGHV1-69-2A0A0G2JMI3 117 aa2.92□□□□□ -1.94
LRRC28-205ENST00000558248 A8MT66 165 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms