RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 SLC35A3Q9Y2D2 325 aa1.06□□□□□ -2.24
GPHN-216ENST00000557678 ADAMTS7Q9UKP4 1686 aa1.06□□□□□ -2.24
GPHN-216ENST00000557678 KIAA2026Q5HYC2 2103 aa1.06□□□□□ -2.24
GPHN-216ENST00000557678 SCAF11Q99590 1463 aaKnown RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 SBF1O95248 1867 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 CPAMD8Q8IZJ3 1885 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 MPDZO75970 2070 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 IGLV3-9A0A075B6K5 115 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 TMSB15BA0A087X1C1 80 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 TRGV10A0A0A0MS01 117 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 TRGV4A0A0C4DH28 118 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 DUXBA0A1W2PPF3 345 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 ARRDC5A6NEK1 342 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 RFPL4AA6NLU0 287 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 CLDN25C9JDP6 229 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 RFPL4AL1F8VTS6 287 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 TRAPPC2LH3BP13 241 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 J3QQQ9 107 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 SDCBPO00560 298 aaPredicted RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 MFSD11O43934 449 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 IFNA14P01570 189 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 HTR1AP08908 422 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 LGALS3P17931 250 aaKnown RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 PEBP1P30086 187 aaKnown RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 RPL26P61254 145 aaKnown RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 FOXF1Q12946 379 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 RRN3P1Q2M238 152 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 SPANXN5Q5MJ07 72 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 FAM27BQ5VT28 67 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 DCUN1D2Q6PH85 259 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 TOMM20LQ6UXN7 152 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 BPIFA4PQ86YQ2 179 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 IFT20Q8IY31 132 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 FAM24BQ8N5W8 94 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 Q8NDZ9 215 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 OR4E2Q8NGC2 313 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 OR4D11Q8NGI4 311 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 OR8D4Q8NGM9 314 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 SKA2Q8WVK7 121 aaPredicted RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 CANT1Q8WVQ1 401 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 RTL8AQ9BWD3 113 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 C8orf4Q9NR00 106 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 C19orf12Q9NSK7 152 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 PRO2289Q9P1D8 64 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 SS18L2Q9UHA2 77 aa1.05□□□□□ -2.24
GPHN-216ENST00000557678 RPL26L1Q9UNX3 145 aaKnown RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 AMMECR1Q9Y4X0 333 aaPredicted RBP1.05□□□□□ -2.24
GPHN-216ENST00000557678 SMARCA4P51532 1647 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 PIK3C2AO00443 1686 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 COL4A2P08572 1712 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 VIRMAQ69YN4 1812 aaKnown RBP1.04□□□□□ -2.24
GPHN-216ENST00000557678 PLXNA3P51805 1871 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 NUP210LQ5VU65 1888 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 A0A0D9SEW6 157 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 MAP1LC3B2A6NCE7 125 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 SDHAF1A6NFY7 115 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 C1orf196B1AJZ1 125 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 F8W036 122 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 C3orf84H3BNL1 204 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 FAM107AO95990 144 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 NAPSAO96009 420 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 TRGC1P0CF51 173 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 OGNP20774 298 aaKnown RBP1.04□□□□□ -2.24
GPHN-216ENST00000557678 UBE2BP63146 152 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 SUPT4H1P63272 117 aaKnown RBP1.04□□□□□ -2.24
GPHN-216ENST00000557678 MYL5Q02045 173 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 SS18Q15532 418 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 TMEM78Q5T7P6 136 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 C22orf39Q6P5X5 142 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 DHFR2Q86XF0 187 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 LINC00471Q8N535 108 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 WFDC11Q8NEX6 87 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 OR8B3Q8NGG8 313 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 OR2T10Q8NGZ9 312 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 TEX47Q8TBZ9 253 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 TEX37Q96LM6 180 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 LINC00467Q9BRT7 94 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 MAP1LC3BQ9GZQ8 125 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 TMEM133Q9H2Q1 129 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 MED29Q9NX70 200 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 SPANXCQ9NY87 97 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 BAIAP2Q9UQB8 552 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 HSPB11Q9Y547 144 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 RTEL1-TNFRSF6BF6WH68 1400 aa1.04□□□□□ -2.24
GPHN-216ENST00000557678 TRAV5A0A0B4J249 113 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 J3QRE1 110 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 TAX1BP3O14907 124 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 ORC5O43913 435 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 CST8O60676 142 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 PMP2P02689 132 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 CSRP1P21291 193 aaKnown RBP1.03□□□□□ -2.24
GPHN-216ENST00000557678 S100GP29377 79 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 SRIP30626 198 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 PSMD8P48556 350 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 DEFA3P59666 94 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 KISS1Q15726 138 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 ZNF181Q2M3W8 571 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 ZNF791Q3KP31 576 aaPredicted RBP1.03□□□□□ -2.24
GPHN-216ENST00000557678 SAMD13Q5VXD3 122 aa1.03□□□□□ -2.24
GPHN-216ENST00000557678 ANGPTL5Q86XS5 388 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms