RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TBC1D24Q9ULP9 559 aa9.42□□□□□ -0.9
SLIRP-211ENST00000557623 TRAV14DV4A0A0A6YYC5 116 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 A8MZ25 164 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 IFNA4P05014 189 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 CD81P60033 236 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 PRSS54Q6PEW0 395 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 TOMM20LQ6UXN7 152 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 TMEM61Q8N0U2 210 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 TMEM170AQ8WVE7 144 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 WDR89Q96FK6 387 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-211ENST00000557623 NEURL2Q9BR09 285 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 MRPL36Q9P0J6 103 aaKnown RBP9.41□□□□□ -0.9
SLIRP-211ENST00000557623 SMPXQ9UHP9 88 aa9.41□□□□□ -0.9
SLIRP-211ENST00000557623 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
SLIRP-211ENST00000557623 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 SCO2A0A1W2PP80 73 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 WRBO00258 174 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.9
SLIRP-211ENST00000557623 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 IAPPP10997 89 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-211ENST00000557623 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-211ENST00000557623 RND2P52198 227 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 ID3Q02535 119 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 C11orf87Q6NUJ2 197 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 SLC16A13Q7RTY0 426 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 OR52B4Q8NGK2 314 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 ENKURQ8TC29 256 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 ZNF431Q8TF32 576 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-211ENST00000557623 ZNF414Q96IQ9 312 aa9.4□□□□□ -0.9
SLIRP-211ENST00000557623 MPTX1A8MV57 137 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 CHEK1O14757 476 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 TSPAN4O14817 238 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
SLIRP-211ENST00000557623 CD5P06127 495 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 IGLC1P0CG04 106 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 OR10J1P30954 320 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 DEFA1P59665 94 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 DEFA3P59666 94 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-211ENST00000557623 TIGITQ495A1 244 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 OR4D5Q8NGN0 318 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 Q8WTZ3 238 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-211ENST00000557623 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 TUBA4BQ9H853 241 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
SLIRP-211ENST00000557623 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
SLIRP-211ENST00000557623 A0A1W2PS18 150 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 CD7P09564 240 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 NPPCP23582 126 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 IAH1Q2TAA2 248 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-211ENST00000557623 C12orf45Q8N5I9 185 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-211ENST00000557623 NARS2Q96I59 477 aaKnown RBP9.38□□□□□ -0.91
SLIRP-211ENST00000557623 METTL26Q96S19 204 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 SEC22CQ9BRL7 303 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 STRAPQ9Y3F4 350 aaKnown RBP9.38□□□□□ -0.91
SLIRP-211ENST00000557623 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
SLIRP-211ENST00000557623 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 IL5P05113 134 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
SLIRP-211ENST00000557623 IFITM3Q01628 133 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 SPANXN5Q5MJ07 72 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 ZBTB8BQ8NAP8 495 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-211ENST00000557623 RNF2Q99496 336 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 ASCL2Q99929 193 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
SLIRP-211ENST00000557623 GPN1Q9HCN4 374 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-211ENST00000557623 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 OR4C46A6NHA9 309 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 SSSCA1O60232 199 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 TOMM40O96008 361 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 FABP1P07148 127 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 RD3LP0DJH9 198 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 GAMTQ14353 236 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 SBSPONQ8IVN8 264 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 SMIM8Q96KF7 97 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 RAB40CQ96S21 281 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 PSENENQ9NZ42 101 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 GSKIPQ9P0R6 139 aa9.36□□□□□ -0.91
SLIRP-211ENST00000557623 C5orf51A6NDU8 294 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 PRAF2O60831 178 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 CRYBB3P26998 211 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-211ENST00000557623 TAS2R30P59541 319 aa9.35□□□□□ -0.91
SLIRP-211ENST00000557623 FAM90A2PQ658T7 463 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms