RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 OR1S2Q8NGQ3 325 aa11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 C20orf24Q9BUV8 137 aa11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 IGLV1-51P01701 117 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 CXCL3P19876 107 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 OR10J1P30954 320 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 FCN2Q15485 313 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 OR8G2PQ6IF36 304 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 ZNF600Q6ZNG1 722 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 UFC1Q9Y3C8 167 aa11.27□□□□□ -0.61
VIPAS39-210ENST00000557466 ZNF207O43670 478 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 SCGB2A1O75556 95 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 DEDDO75618 318 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 FOLR2P14207 255 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 PVALBP20472 110 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 BCAP31P51572 246 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 CAV2P51636 162 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 ELLP55199 621 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 CYCSP99999 105 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 OR11H7Q8NGC8 314 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 MED28Q9H204 178 aa11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 PUS1Q9Y606 427 aaKnown RBP eCLIP11.26□□□□□ -0.61
VIPAS39-210ENST00000557466 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 FAM24AA6NFZ4 105 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 H0YIZ8 118 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 YIF1AO95070 293 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 CBLN1P23435 193 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 DEFA6Q01524 100 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 AURKAIP1Q9NWT8 199 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 OR5AC2Q9NZP5 309 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 SELENOKQ9Y6D0 94 aa11.25□□□□□ -0.61
VIPAS39-210ENST00000557466 NOTCH1P46531 2555 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 IGKV1OR2-108A0A075B7D4 117 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 IGSF23A1L1A6 192 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 ZFP92A6NM28 416 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 K7EMT4 169 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 C8orf88P0DMB2 117 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 RRAS2P62070 204 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 DLK1P80370 383 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 BTNL8Q6UX41 500 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 THAP8Q8NA92 274 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 OR10P1Q8NGE3 313 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 MARC2Q969Z3 335 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 MRPL27Q9P0M9 148 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 MLXQ9UH92 298 aa11.24□□□□□ -0.61
VIPAS39-210ENST00000557466 SMCO3A2RU48 225 aa11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 IZUMO1RA6ND01 250 aa11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 SCAF4O95104 1147 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 TOMM40O96008 361 aa11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 TMEM252Q8N6L7 170 aa11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 PRR25Q96S07 402 aa11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 GINS3Q9BRX5 216 aa11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 ZNF256Q9Y2P7 627 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-210ENST00000557466 IGHV3-49A0A0A0MS15 119 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 IGHV7-4-1A0A0J9YVY3 117 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 E5RGE8 158 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 CST7O76096 145 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 MPC2O95563 127 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 RLN2P04090 185 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 ZNF90Q03938 601 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 SLC38A11Q08AI6 406 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 DEFB114Q30KQ6 69 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 OR2K2Q8NGT1 345 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 Q8WTZ3 238 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 TRGV9Q99603 122 aa11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 TECRQ9NZ01 308 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 ZMAT5Q9UDW3 170 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-210ENST00000557466 WI2-2373I1.2A0A1W2PRP0 233 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 FNDC10F2Z333 226 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 PSG1P11464 419 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 P2RY1P47900 373 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 SULT1A1P50225 295 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 LCN12Q6JVE5 192 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 TMEM144Q7Z5S9 345 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 RNF126Q9BV68 326 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 SMPXQ9UHP9 88 aa11.21□□□□□ -0.61
VIPAS39-210ENST00000557466 IGHV3OR16-13A0A075B7E8 117 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 IGHV3-74A0A0B4J1X5 117 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 APOHP02749 345 aaPredicted RBP11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 IL4P05112 153 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 PET100P0DJ07 73 aa11.2□□□□□ -0.62
VIPAS39-210ENST00000557466 GP9P14770 177 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms