RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PET100P0DJ07 73 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF728P0DKX0 622 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PPIAL4FP0DN26 164 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 SLC25A4P12235 298 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 HNF1AP20823 631 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 CD34P28906 385 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 S100GP29377 79 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 GNRHRP30968 328 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 UQCRFS1P47985 274 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RAB7AP51149 207 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF137PP52743 207 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 TMEM33P57088 247 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 SUPT4H1P63272 117 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 IL15RAQ13261 267 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PPP1R1AQ13522 171 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF345Q14585 488 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 IGFBP7Q16270 282 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 SCGB2B2Q4G0G5 96 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 DMRTC1Q5HYR2 192 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PRAMEF6Q5VXH4 476 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 HEPN1Q6WQI6 88 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 Q6ZN92 141 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF826PQ6ZT77 177 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 SGPP2Q8IWX5 399 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 CMTM1Q8IZ96 169 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 C12orf45Q8N5I9 185 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 LINC00311Q8N616 119 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF645Q8N7E2 425 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF565Q8N9K5 539 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ASCC1Q8N9N2 400 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 NKAPP1Q8N9T2 125 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 OR11H7Q8NGC8 314 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 OR10J5Q8NHC4 309 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 COQ8AQ8NI60 647 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 LINC01560Q8TB33 94 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PLPPR1Q8TBJ4 325 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 NEK7Q8TDX7 302 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 CHCHD10Q8WYQ3 142 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 TNFRSF14Q92956 283 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 COQ2Q96H96 371 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 FAM210BQ96KR6 192 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF488Q96MN9 340 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 TMEM56Q96MV1 263 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RBM14Q96PK6 669 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 GAFA1Q96PS6 74 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 YPEL2Q96QA6 119 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RASL11BQ9BPW5 248 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 AGMATQ9BSE5 352 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF2Q9BSG1 426 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 HDHD3Q9BSH5 251 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 NMES1Q9C002 83 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF436Q9C0F3 470 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 FXYD6Q9H0Q3 95 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RAB1BQ9H0U4 201 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 GAL3ST2Q9H3Q3 398 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RBKSQ9H477 322 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 NAA60Q9H7X0 242 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 TAF9BQ9HBM6 251 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 DYNLRB1Q9NP97 96 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 SLC2A9Q9NRM0 540 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 COA4Q9NYJ1 87 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 KCNIP1Q9NZI2 227 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PIPOXQ9P0Z9 390 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF230Q9UIE0 474 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 TRAPPC2LQ9UL33 140 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 FLVCR2Q9UPI3 526 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 C14orf166Q9Y224 244 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 KCNIP3Q9Y2W7 256 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 TMEM56-RWDD3S4R434 201 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 POLQO75417 2590 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 FLNAP21333 2647 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 UNC79Q9P2D8 2635 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 GCN1Q92616 2671 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 IGHV3-64DA0A0J9YX35 117 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 KBTBD11-OT1A0A1B0GTJ5 212 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 hADV38S2A0JD32 116 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 C17orf98A8MV24 154 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 C12orf77C9JDV5 145 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 G3V3Q6 166 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 NDUFS8O00217 210 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SIRPB1O00241 398 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SDCBPO00560 298 aaPredicted RBP2.11□□□□□ -2.07
VRK1-207ENST00000557352 AGPAT2O15120 278 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SSNA1O43805 119 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 ATG12O94817 140 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 IGHG4P01861 327 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 HBZP02008 142 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SCTP09683 121 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CXCL3P19876 107 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 F2RP25116 425 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 GABRA2P47869 451 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 EFNA4P52798 201 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 H2BFSP57053 126 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 PIGPP57054 158 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CCL8P80075 99 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 AESQ08117 197 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 CATR1Q13166 79 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 SLAQ13239 276 aa2.11□□□□□ -2.07
VRK1-207ENST00000557352 POU2AF1Q16633 256 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms