RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RND2P52198 227 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 ID3Q02535 119 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 C11orf87Q6NUJ2 197 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 SLC16A13Q7RTY0 426 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 OR52B4Q8NGK2 314 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 ZNF431Q8TF32 576 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-209ENST00000557342 ZNF414Q96IQ9 312 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 MPTX1A8MV57 137 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 CHEK1O14757 476 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 TSPAN4O14817 238 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
SLIRP-209ENST00000557342 CD5P06127 495 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 IGLC1P0CG04 106 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 OR10J1P30954 320 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-209ENST00000557342 TIGITQ495A1 244 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 OR4D5Q8NGN0 318 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 Q8WTZ3 238 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
SLIRP-209ENST00000557342 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 TMEM231Q9H6L2 316 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 TUBA4BQ9H853 241 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
SLIRP-209ENST00000557342 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
SLIRP-209ENST00000557342 A0A1W2PS18 150 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 PRAF2O60831 178 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 CD7P09564 240 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 NPPCP23582 126 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 IAH1Q2TAA2 248 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-209ENST00000557342 C12orf45Q8N5I9 185 aaPredicted RBP9.38□□□□□ -0.91
SLIRP-209ENST00000557342 NARS2Q96I59 477 aaKnown RBP9.38□□□□□ -0.91
SLIRP-209ENST00000557342 METTL26Q96S19 204 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 SEC22CQ9BRL7 303 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 STRAPQ9Y3F4 350 aaKnown RBP9.38□□□□□ -0.91
SLIRP-209ENST00000557342 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
SLIRP-209ENST00000557342 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
SLIRP-209ENST00000557342 IL5P05113 134 aa9.37□□□□□ -0.91
SLIRP-209ENST00000557342 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
SLIRP-209ENST00000557342 SPANXN5Q5MJ07 72 aa9.37□□□□□ -0.91
SLIRP-209ENST00000557342 ZBTB8BQ8NAP8 495 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-209ENST00000557342 RNF2Q99496 336 aa9.37□□□□□ -0.91
SLIRP-209ENST00000557342 ASCL2Q99929 193 aa9.37□□□□□ -0.91
SLIRP-209ENST00000557342 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
SLIRP-209ENST00000557342 GPN1Q9HCN4 374 aaPredicted RBP9.37□□□□□ -0.91
SLIRP-209ENST00000557342 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 C7orf66A4D0T2 115 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 OR4C46A6NHA9 309 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 SSSCA1O60232 199 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 TOMM40O96008 361 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 FABP1P07148 127 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 RD3LP0DJH9 198 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 GAMTQ14353 236 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 SBSPONQ8IVN8 264 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 SMIM8Q96KF7 97 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 RAB40CQ96S21 281 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 PSENENQ9NZ42 101 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 GSKIPQ9P0R6 139 aa9.36□□□□□ -0.91
SLIRP-209ENST00000557342 C5orf51A6NDU8 294 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 CRYBB3P26998 211 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
SLIRP-209ENST00000557342 TAS2R30P59541 319 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 FAM90A2PQ658T7 463 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 U3KQK5 164 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 TGP01266 2768 aa9.35□□□□□ -0.91
SLIRP-209ENST00000557342 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 A0A1B0GVG6 124 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 SNRPGP15A8MWD9 76 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 H3BP45 60 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 CCSO14618 274 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 IL4P05112 153 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
SLIRP-209ENST00000557342 EIF2B2P49770 351 aaKnown RBP9.34□□□□□ -0.91
SLIRP-209ENST00000557342 GSG1LQ6UXU4 331 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 DEFB125Q8N687 156 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 OR51G1Q8NGK1 321 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 C2orf50Q96LR7 162 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 TRGV9Q99603 122 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 ALG5Q9Y673 324 aa9.34□□□□□ -0.91
SLIRP-209ENST00000557342 PRSS46E5RG02 174 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 L7N2F9 121 aa9.33□□□□□ -0.92
SLIRP-209ENST00000557342 TSC22D2O75157 780 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms