RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 HRASLSQ9HDD0 168 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 NDUFA4L2Q9NRX3 87 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF446Q9NWS9 450 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF586Q9NXT0 402 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 PKHD1L1Q86WI1 4243 aa3.2□□□□□ -1.9
SCFD1-223ENST00000557076 IGHV3OR16-12A0A075B7B8 117 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TRAV3A0A0B4J244 114 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 IGHV3-66A0A0C4DH42 116 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TEX50A0A1B0GTY4 177 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 HELTA6NFD8 242 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 I3L2K1 104 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 RBFOX2O43251 390 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCFD1-223ENST00000557076 ATP5G1P05496 136 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 CTXN2P0C2S0 81 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 NKX2-1P43699 371 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-223ENST00000557076 ATP5G3P48201 142 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 EIF2B2P49770 351 aaKnown RBP3.19□□□□□ -1.9
SCFD1-223ENST00000557076 ETV1P50549 477 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TAS2R31P59538 309 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 SNRPD3P62318 126 aaKnown RBP3.19□□□□□ -1.9
SCFD1-223ENST00000557076 ESRGQ1W209 222 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 RRN3P1Q2M238 152 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TIMM50Q3ZCQ8 353 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 OR2B11Q5JQS5 317 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 PSMG4Q5JS54 123 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TMEM69Q5SWH9 247 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF600Q6ZNG1 722 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 Q6ZS49 121 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TCTEX1D2Q8WW35 142 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 TMEM18Q96B42 140 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 PGLYRP3Q96LB9 341 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 DCSTAMPQ9H295 470 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 AMBNQ9NP70 447 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 FGF20Q9NP95 211 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-223ENST00000557076 SPATA2Q9UM82 520 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 KCNK7Q9Y2U2 307 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 MRPS16Q9Y3D3 137 aaKnown RBP3.19□□□□□ -1.9
SCFD1-223ENST00000557076 GOLT1BQ9Y3E0 138 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 OR2W1Q9Y3N9 320 aa3.19□□□□□ -1.9
SCFD1-223ENST00000557076 FAM90A26D6RGX4 464 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 CTDSP2O14595 271 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 GNG7O60262 68 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 HPRT1P00492 218 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 LALBAP00709 142 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 FCGR3AP08637 254 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 HLA-DRB4P13762 266 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 NQO2P16083 231 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 MAPK3P27361 379 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-223ENST00000557076 TSPOP30536 169 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 P2RY1P47900 373 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 NPBWR1P48145 328 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 HAMPP81172 84 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 MRPS15P82914 257 aaKnown RBP3.18□□□□□ -1.9
SCFD1-223ENST00000557076 DHRS2Q13268 280 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 FLOT2Q14254 428 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 P2RY14Q15391 338 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 MSMO1Q15800 293 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 C1orf158Q8N1D5 194 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF709Q8N972 641 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF485Q8NCK3 441 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 OR56B1Q8NGI3 324 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 RXFP4Q8TDU9 374 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 PHYHIPQ92561 330 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 LSM10Q969L4 123 aaKnown RBP3.18□□□□□ -1.9
SCFD1-223ENST00000557076 MOB3AQ96BX8 217 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 SAT2Q96F10 170 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-223ENST00000557076 UHRF2Q96PU4 802 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 METTL26Q96S19 204 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 HLA-DRB4X5D2U9 266 aa3.18□□□□□ -1.9
SCFD1-223ENST00000557076 IGKV1D-13A0A0B4J2D9 117 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 A0A1B0GU03 582 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 H3BNG1 76 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 J3QRK9 145 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 TMEM50AO95807 157 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 IGKV1-13P0DP09 117 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 DEFB130BP0DP73 79 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 DEFB130AP0DP74 79 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 PRB4P10163 310 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-223ENST00000557076 ZNF182P17025 639 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-223ENST00000557076 CALB2P22676 271 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 ASIPP42127 132 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 RANBP1P43487 201 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 CAMPP49913 170 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-223ENST00000557076 B2MP61769 119 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 PSG9Q00887 426 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 ACSM3Q53FZ2 586 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 SPAG16Q8N0X2 631 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 OR13F1Q8NGS4 319 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 GNPNAT1Q96EK6 184 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-223ENST00000557076 CENPNQ96H22 339 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-223ENST00000557076 NARS2Q96I59 477 aaKnown RBP3.17□□□□□ -1.9
SCFD1-223ENST00000557076 TMEM56Q96MV1 263 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 ABHD1Q96SE0 405 aa3.17□□□□□ -1.9
SCFD1-223ENST00000557076 C7orf50Q9BRJ6 194 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms