RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GRAMD2BQ96HH9 432 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 MRPL32Q9BYC8 188 aaKnown RBP9.21□□□□□ -0.93
SRP54-213ENST00000556994 TNFRSF19Q9NS68 423 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 CLEC5AQ9NY25 188 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 CEP250Q9BV73 2442 aa9.21□□□□□ -0.93
SRP54-213ENST00000556994 BDP1A6H8Y1 2624 aa9.21□□□□□ -0.94
SRP54-213ENST00000556994 H3BTX0 84 aa9.21□□□□□ -0.94
SRP54-213ENST00000556994 RELQ04864 619 aaPredicted RBP9.21□□□□□ -0.94
SRP54-213ENST00000556994 ZNF788Q6ZQV5 615 aa9.21□□□□□ -0.94
SRP54-213ENST00000556994 TCF24Q7RTU0 167 aa9.21□□□□□ -0.94
SRP54-213ENST00000556994 KLHDC1Q8N7A1 406 aa9.21□□□□□ -0.94
SRP54-213ENST00000556994 OR2D3Q8NGH3 330 aa9.21□□□□□ -0.94
SRP54-213ENST00000556994 ALKBH7Q9BT30 221 aaPredicted RBP9.21□□□□□ -0.94
SRP54-213ENST00000556994 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.94
SRP54-213ENST00000556994 ABCA1O95477 2261 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 CGB1A6NKQ9 187 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 CCL25O15444 150 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 IGLL1P15814 213 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 ORM2P19652 201 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 CCL8P80075 99 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 LINC00305Q7Z4B0 112 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 ST6GALNAC6Q969X2 333 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 PPP1R14DQ9NXH3 145 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 IGKV1D-37A0A075B6S9 117 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 TRAV17A0A0B4J275 112 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 H0YJW9 148 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 MOSP00540 346 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 APELAP0DMC3 54 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 FOXA3P55318 350 aaPredicted RBP9.2□□□□□ -0.94
SRP54-213ENST00000556994 PLA2G2CQ5R387 149 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 WIPF2Q8TF74 440 aaPredicted RBP9.2□□□□□ -0.94
SRP54-213ENST00000556994 CACNG8Q8WXS5 425 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 ZNF714Q96N38 554 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 NCOR1P1Q9H4R4 102 aa9.2□□□□□ -0.94
SRP54-213ENST00000556994 IGLV3-9A0A075B6K5 115 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 C20orf202A1L168 122 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 APOA2P02652 100 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 SLC25A5P05141 298 aaKnown RBP9.19□□□□□ -0.94
SRP54-213ENST00000556994 PTTG1IPP53801 180 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 UBE2G1P62253 170 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 LINC00322Q6ZN03 302 aaPredicted RBP9.19□□□□□ -0.94
SRP54-213ENST00000556994 FAM231DQ6ZW35 169 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
SRP54-213ENST00000556994 FLYWCH2Q96CP2 140 aaKnown RBP9.19□□□□□ -0.94
SRP54-213ENST00000556994 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 CBY1Q9Y3M2 126 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 PGPA6NDG6 321 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 C2orf70A6NJV1 201 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 GATA4P43694 442 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 TIMM23BQ5SRD1 257 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 ZNF833PQ6ZTB9 187 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 FAM169BQ8N8A8 192 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 OR8B3Q8NGG8 313 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 OR1B1Q8NGR6 318 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 OSR1Q8TAX0 266 aaPredicted RBP9.19□□□□□ -0.94
SRP54-213ENST00000556994 OR8B2Q96RD0 313 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 ZNF430Q9H8G1 570 aaPredicted RBP9.19□□□□□ -0.94
SRP54-213ENST00000556994 SAP30LQ9HAJ7 183 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 TPSG1Q9NRR2 321 aa9.19□□□□□ -0.94
SRP54-213ENST00000556994 TRAV9-2A0A087WT02 112 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 TCRBV4S1A1TA0A5B7 111 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 hADV38S2A0JD32 116 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 FSTL3O95633 263 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 PRB4P10163 310 aaPredicted RBP9.18□□□□□ -0.94
SRP54-213ENST00000556994 FAM27E3Q08E93 113 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 DEFB109BQ30KR1 87 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 HCP5Q6MZN7 132 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 LINC00173Q6ZV60 143 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 ERASQ7Z444 233 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 RITA1Q96K30 269 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 C7orf69Q9H7B7 122 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 TACC2O95359 2948 aa9.18□□□□□ -0.94
SRP54-213ENST00000556994 TM4SF5O14894 197 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 FCN3O75636 299 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 ATP5IP56385 69 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 LEMD1Q68G75 181 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 DEFB123Q8N688 67 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 OR1L4Q8NGR5 311 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 LINC00574Q9H8X3 128 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 EPDR1Q9UM22 224 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 EP300Q09472 2414 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 ZZEF1O43149 2961 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 IGHV2-26A0A0B4J1V2 119 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 MBD3L4A6NDZ8 208 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 MBD3L3A6NE82 208 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 MBD3L5A6NJ08 208 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 ZNF137PP52743 207 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 BPIFB3P59826 476 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 SSX8Q7RTT4 187 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 PDPNQ86YL7 162 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 OR5AN1Q8NGI8 311 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 MBD3L2Q8NHZ7 208 aaPredicted RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 H1FXQ92522 213 aaKnown RBP9.17□□□□□ -0.94
SRP54-213ENST00000556994 PGLYRP4Q96LB8 373 aa9.17□□□□□ -0.94
SRP54-213ENST00000556994 LINC00312Q9Y6C7 94 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms