RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 A0A087WXM4 84 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 HTR2BP41595 481 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 RND2P52198 227 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 SPCS3P61009 180 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 PRSS54Q6PEW0 395 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 OR4D10Q8NGI6 311 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 OR13C8Q8NGS7 320 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 FUNDC2Q9BWH2 189 aa13.16□□□□□ -0.3
VIPAS39-209ENST00000556909 FAM25AB3EWG3 89 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 FAM90A26D6RGX4 464 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 TBPP20226 339 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 OR10J1P30954 320 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 OR52E5Q8NH55 327 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 Q8WTZ3 238 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 MTFP1Q9UDX5 166 aa13.15□□□□□ -0.3
VIPAS39-209ENST00000556909 MUC4Q99102 2169 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 B3GALNT1O75752 331 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 AP2S1P53680 142 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 YPEL3P61236 119 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 DHODHQ02127 395 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 TERB2Q8NHR7 220 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 C1QTNF4Q9BXJ3 329 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 HEYLQ9NQ87 328 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
VIPAS39-209ENST00000556909 IL4P05112 153 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 OR5AC1P0C628 307 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 P0DMU3 169 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 FAM231AP0DMU4 169 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 FAM231CP0DMU5 169 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 SLC25A4P12235 298 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 RORCP51449 518 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 SCGB2B2Q4G0G5 96 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 SLC24A4Q8NFF2 622 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 TMEM170AQ8WVE7 144 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 NDUFAF3Q9BU61 184 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 TMEM222Q9H0R3 208 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 SEPSECSQ9HD40 501 aaKnown RBP13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 NRN1Q9NPD7 142 aa13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
VIPAS39-209ENST00000556909 H3BMM0 161 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 RTL8CO15255 209 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 TNFAIP8O95379 198 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 CDS2O95674 445 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 CD74P04233 296 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 MZT2AQ6P582 158 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 TMEM229BQ8NBD8 167 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 EXTL2Q9UBQ6 330 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 CACNG5Q9UF02 275 aa13.12□□□□□ -0.31
VIPAS39-209ENST00000556909 PRSS29PA6NIE9 313 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 BUB3O43684 328 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 TAS2R19P59542 299 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 GLYATL2Q8WU03 294 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 ABHD1Q96SE0 405 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 NAA60Q9H7X0 242 aa13.11□□□□□ -0.31
VIPAS39-209ENST00000556909 M0R2N4 97 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 GSTZ1O43708 216 aaPredicted RBP13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 NXPH3O95157 252 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 RAB3DO95716 219 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 TOMM40O96008 361 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 MED14OSP0DP75 135 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 HLA-DRB4P13762 266 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 NPY1RP25929 384 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 STEAP1BQ6NZ63 245 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 SELENOHQ8IZQ5 122 aaKnown RBP13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 AP3S1Q92572 193 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 GPR146Q96CH1 333 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 HLA-DRB4X5D2U9 266 aa13.1□□□□□ -0.31
VIPAS39-209ENST00000556909 TEX13DA0A0J9YY54 714 aaPredicted RBP13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 CEBPZOSA8MTT3 80 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 GDF5OSQ5U4N7 250 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 ETFRF1Q6IPR1 90 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 FAAP20Q6NZ36 180 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 NEU1Q99519 415 aa13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 RTBDNQ9BSG5 229 aaPredicted RBP13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 C14orf166Q9Y224 244 aaKnown RBP13.09□□□□□ -0.31
VIPAS39-209ENST00000556909 NACAE9PAV3 2078 aa13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 ZNF705FA8MVS1 300 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
VIPAS39-209ENST00000556909 RD3LP0DJH9 198 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms