RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ATP6V0BQ99437 205 aa10.77□□□□□ -0.68
VIPAS39-208ENST00000556412 IGHV3OR16-8A0A075B7F1 116 aa10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 RPL12P30050 165 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 HBG1P69891 147 aa10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 HBG2P69892 147 aa10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 NHLH2Q02577 135 aa10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 RELQ04864 619 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 FAM106AQ4KMX7 169 aa10.77□□□□□ -0.69
VIPAS39-208ENST00000556412 TRAV30A0A087WSZ9 112 aa10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 OVOL1O14753 267 aa10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 SCAF4O95104 1147 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 IGLC1P0CG04 106 aa10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 DLK1P80370 383 aa10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 KLF5Q13887 457 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 C1QL4Q86Z23 238 aa10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 C20orf24Q9BUV8 137 aa10.76□□□□□ -0.69
VIPAS39-208ENST00000556412 LYL1P12980 280 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 S100A11P31949 105 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 NUP62P37198 522 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 CLINT1Q14677 625 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 TREML4Q6UXN2 200 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 OR1S2Q8NGQ3 325 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 OR5C1Q8NGR4 320 aa10.75□□□□□ -0.69
VIPAS39-208ENST00000556412 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 BAXQ07812 192 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 PRR31Q5SQ13 230 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 ZNF546Q86UE3 836 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 AKAP14Q86UN6 197 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 GPHB5Q86YW7 130 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 UQCC1Q9NVA1 299 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 PUS1Q9Y606 427 aaKnown RBP eCLIP10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 UBE2L5PA0A1B0GUS4 154 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 AP2S1P53680 142 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 ZNF90Q03938 601 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 INO80EQ8NBZ0 244 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 RCC1LQ96I51 464 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 TMEM147Q9BVK8 224 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 NPVFQ9HCQ7 196 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 HSPB11Q9Y547 144 aa10.74□□□□□ -0.69
VIPAS39-208ENST00000556412 IGKV1OR2-108A0A075B7D4 117 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 G3V3Q6 166 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 NDUFA4O00483 81 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 ZNF207O43670 478 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 RD3LP0DJH9 198 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 OR2F1Q13607 317 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 TMEM144Q7Z5S9 345 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 Q8WTZ3 238 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 ST6GAL2Q96JF0 529 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 DNHD1Q96M86 4753 aa10.73□□□□□ -0.69
VIPAS39-208ENST00000556412 IGKV1D-37A0A075B6S9 117 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 SEC14L6B5MCN3 397 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 ARPC5O15511 151 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 SAP30O75446 220 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 FABP1P07148 127 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 IGLL1P15814 213 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 TOMM20LQ6UXN7 152 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 TMEM190Q8WZ59 177 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 ELOVL1Q9BW60 279 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 UFC1Q9Y3C8 167 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 FNDC10F2Z333 226 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 PSG1P11464 419 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 ATP6V1FQ16864 119 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 TM4SF20Q53R12 229 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 TEPPQ6URK8 271 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 REC114Q7Z4M0 266 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 TRGV9Q99603 122 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 PBDC1Q9BVG4 233 aa10.72□□□□□ -0.69
VIPAS39-208ENST00000556412 LGALS9O00182 355 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 TOMM40O96008 361 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 IL4P05112 153 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 EDN2P20800 178 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 WFDC9Q8NEX5 89 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 AQP10Q96PS8 301 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 TNFSF18Q9UNG2 199 aa10.71□□□□□ -0.69
VIPAS39-208ENST00000556412 ANK2Q01484 3957 aa10.71□□□□□ -0.7
VIPAS39-208ENST00000556412 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 FGF7P21781 194 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 GATA2P23769 480 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 BTNL8Q6UX41 500 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 ZNF414Q96IQ9 312 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 ATP5SQ99766 215 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 GINS3Q9BRX5 216 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 DAZ1Q9NQZ3 744 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 FBXL17Q9UF56 701 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 SELENOKQ9Y6D0 94 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 C2orf70A6NJV1 201 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 LYZP61626 148 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 VWC2Q2TAL6 325 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 CYP2G1PQ6ZSU1 146 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 TCTE3Q8IZS6 198 aa10.7□□□□□ -0.7
VIPAS39-208ENST00000556412 OR11H4Q8NGC9 324 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms