RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ERVFC1-1P60608 527 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 MRPS11P82912 194 aaKnown RBP3.58□□□□□ -1.84
ATXN3-241ENST00000556374 MORN2Q502X0 79 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 MIC13Q5XKP0 118 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 PQLC2Q6ZP29 291 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 TMEM144Q7Z5S9 345 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 MOGAT3Q86VF5 341 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 KIR2DL5AQ8N109 375 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 LYG1Q8N1E2 194 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 TPRX1Q8N7U7 411 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 SIGLECL1Q8N7X8 197 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 OR4P4Q8NGL7 312 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 OR1L4Q8NGR5 311 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 RFESDQ8TAC1 157 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 SSMEM1Q8WWF3 244 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 C22orf15Q8WYQ4 148 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 C11orf52Q96A22 123 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 C5orf30Q96GV9 206 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 MGST2Q99735 147 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 C19orf24Q9BVV8 132 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 SPRY4Q9C004 299 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 GAL3ST2Q9H3Q3 398 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 SLC35D1Q9NTN3 355 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 IL19Q9UHD0 177 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF257Q9Y2Q1 563 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 OR51B2Q9Y5P1 312 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 ACANP16112 2415 aa3.58□□□□□ -1.84
ATXN3-241ENST00000556374 NSD1Q96L73 2696 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 FBN1P35555 2871 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 IGHV3OR15-7A0A075B7D8 119 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 SAA2-SAA4A0A096LPE2 208 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 hADV38S2A0JD32 116 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 C15orf65H3BRN8 121 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 J3QR06 171 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 K7EM74 188 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 FCN1O00602 326 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 RRHO14718 337 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 TCAPO15273 167 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 SPRY3O43610 288 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 COX7A2P2O60397 106 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 IGLV1-44P01699 117 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 HLA-DQA1P01909 254 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 OR5G3P0C626 314 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 SAA2P0DJI9 122 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 MGST1P10620 155 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 AREGP15514 252 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 EGR1P18146 543 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 VDAC2P45880 294 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 RPL29P47914 159 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 GNG10P50151 68 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF83P51522 516 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 CCL11P51671 97 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 SUB1P53999 127 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 YPEL3P61236 119 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 RPL15P61313 204 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 HSPE1P61604 102 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 RPL31P62899 125 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 UBE2L3P68036 154 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 TNFAIP6P98066 277 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 PRCDQ00LT1 54 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 PSG5Q15238 335 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 EFNB3Q15768 340 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 HLA-DRB5Q30154 266 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 ALKBH6Q3KRA9 238 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 AARDQ4LEZ3 155 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 RPL39P5Q59GN2 51 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 CENPWQ5EE01 88 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 FAM162BQ5T6X4 162 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 OR4A47Q6IF82 309 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 TEX38Q6PEX7 206 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF705AQ6ZN79 300 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 ZADH2Q8N4Q0 377 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 CD177Q8N6Q3 437 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 OR5AU1Q8NGC0 362 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 OR4B1Q8NGF8 309 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 VSTM2AQ8TAG5 236 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 KCNS1Q96KK3 526 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 OR2V2Q96R30 315 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 TBX15Q96SF7 602 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 COMMD5Q9GZQ3 224 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 OPN3Q9H1Y3 402 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 IFI27L2Q9H2X8 130 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 NCOR1P1Q9H4R4 102 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 IDI2-AS1Q9NZ38 188 aa3.57□□□□□ -1.84
ATXN3-241ENST00000556374 ZNF469Q96JG9 3925 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-241ENST00000556374 POLEQ07864 2286 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 NCOA6Q14686 2063 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-241ENST00000556374 KBTBD11-OT1A0A1B0GTJ5 212 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 GRIFINA4D1Z8 144 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 A8MWP6 167 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 VSTM5A8MXK1 200 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 SPRY2O43597 315 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 ACTL6BO94805 426 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 CA2P00918 260 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 TFF1P04155 84 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 DEFA4P12838 97 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 IGFBP2P18065 325 aa3.56□□□□□ -1.84
ATXN3-241ENST00000556374 CBLN1P23435 193 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms