RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF502Q8TBZ5 544 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 LRRC20Q8TCA0 184 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 UBE2E2Q96LR5 201 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 PSMG3Q9BT73 122 aaPredicted RBP7.18□□□□□ -1.26
ACTN1-218ENST00000556343 NPCDR1Q9BY65 106 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 ARV1Q9H2C2 271 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 PFDN2Q9UHV9 154 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 BOLA1Q9Y3E2 137 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 LSM4Q9Y4Z0 139 aaKnown RBP7.18□□□□□ -1.26
ACTN1-218ENST00000556343 DMRT1Q9Y5R6 373 aa7.18□□□□□ -1.26
ACTN1-218ENST00000556343 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 UMAD1C9J7I0 102 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 TSPAN15O95858 294 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 IGHV3-48P01763 117 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 RD3LP0DJH9 198 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 MDKP21741 143 aaPredicted RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 ATP6V0CP27449 155 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 CDX1P47902 265 aaPredicted RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 RAB5CP51148 216 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 YPEL3P61236 119 aaPredicted RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 ZNF616Q08AN1 781 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 ACOT6Q3I5F7 207 aaPredicted RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 KHDC1LQ5JSQ8 128 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 AKR1C8PQ5T2L2 129 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 PXDC1Q5TGL8 231 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 CLEC19AQ6UXS0 136 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 ZNF491Q8N8L2 437 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 C19orf24Q9BVV8 132 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 SLC25A32Q9H2D1 315 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 KLK15Q9H2R5 256 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 GNB4Q9HAV0 340 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 PEF1Q9UBV8 284 aaKnown RBP7.17□□□□□ -1.26
ACTN1-218ENST00000556343 RNF24Q9Y225 148 aa7.17□□□□□ -1.26
ACTN1-218ENST00000556343 MFSD2BA6NFX1 497 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 OR2T8A6NH00 312 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 TGOLN2O43493 480 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 TOMM40O96008 361 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 IGHV3-23P01764 117 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 HSPB1P04792 205 aaKnown RBP7.16□□□□□ -1.26
ACTN1-218ENST00000556343 RPLP1P05386 114 aaKnown RBP7.16□□□□□ -1.26
ACTN1-218ENST00000556343 IGLC1P0CG04 106 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 SPP1P10451 314 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 GPR183P32249 361 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 ARL3P36405 182 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 RAB14P61106 215 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 B2MP61769 119 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 TIGITQ495A1 244 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 ZNF343Q6P1L6 599 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 ZNF600Q6ZNG1 722 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 ZNF767PQ75MW2 155 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 OR1L4Q8NGR5 311 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 PFDN5Q99471 154 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 RNF2Q99496 336 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 MGST2Q99735 147 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 GGTLC1Q9BX51 225 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 TSSC4Q9Y5U2 329 aaPredicted RBP7.16□□□□□ -1.26
ACTN1-218ENST00000556343 PXMP4Q9Y6I8 212 aa7.16□□□□□ -1.26
ACTN1-218ENST00000556343 ELOA3CA0A087WX78 387 aaPredicted RBP7.15□□□□□ -1.26
ACTN1-218ENST00000556343 NUDT19A8MXV4 375 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 TEX46H3BTG2 121 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 GGCTO75223 188 aaKnown RBP7.15□□□□□ -1.26
ACTN1-218ENST00000556343 IGHV3-11P01762 117 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 LGALS1P09382 135 aaKnown RBP7.15□□□□□ -1.26
ACTN1-218ENST00000556343 PROK1P58294 105 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 RAB2AP61019 212 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 FAM106AQ4KMX7 169 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 FFAR4Q5NUL3 377 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 TEX261Q6UWH6 196 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 DPPA3Q6W0C5 159 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 OR51G1Q8NGK1 321 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 MYOZ3Q8TDC0 251 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 RNF141Q8WVD5 230 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 TMEM158Q8WZ71 300 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 DPF1Q92782 380 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 NARS2Q96I59 477 aaKnown RBP7.15□□□□□ -1.26
ACTN1-218ENST00000556343 RSG1Q9BU20 258 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 SLC39A9Q9NUM3 307 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 UBQLN2Q9UHD9 624 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 S4R3C0 116 aa7.15□□□□□ -1.26
ACTN1-218ENST00000556343 IGKV1D-37A0A075B6S9 117 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 A0A1W2PPV4 95 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 ANKRD34BA5PLL1 514 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 BMPR1BO00238 502 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 COX7A2P2O60397 106 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 HYPMO75409 117 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 YIF1AO95070 293 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 CTSGP08311 255 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 LINC00869P0C866 280 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 M6PRP20645 277 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 ZP3P21754 424 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 BLOC1S1P78537 153 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 RUNX1Q01196 453 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 DEFA5Q01523 94 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 ZNF90Q03938 601 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 RPEL1Q2QD12 228 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 TMEM41BQ5BJD5 291 aa7.14□□□□□ -1.27
ACTN1-218ENST00000556343 NIPBLQ6KC79 2804 aaeCLIP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms