RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 FAM240BA0A1B0GVZ2 78 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 SYNGR2O43760 224 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 UPK1BO75841 260 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 IGLC1P0CG04 106 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 OR10J1P30954 320 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 ASAH1Q13510 395 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 LAMTOR1Q6IAA8 161 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 MZT2BQ6NZ67 158 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 NPIPB3Q92617 1050 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 ACY3Q96HD9 319 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 CIB3Q96Q77 187 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-217ENST00000556203 RNF2Q99496 336 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 SPAG8Q99932 426 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-217ENST00000556203 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
ACTN1-217ENST00000556203 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
ACTN1-217ENST00000556203 OR11H12B2RN74 326 aa11.38□□□□□ -0.59
ACTN1-217ENST00000556203 WRBO00258 174 aa11.38□□□□□ -0.59
ACTN1-217ENST00000556203 TSPAN4O14817 238 aa11.38□□□□□ -0.59
ACTN1-217ENST00000556203 U3KQK5 164 aa11.38□□□□□ -0.59
ACTN1-217ENST00000556203 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-217ENST00000556203 H2AFB2P0C5Z0 115 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 BMI1P35226 326 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 NKX2-1P43699 371 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-217ENST00000556203 RAB11AP62491 216 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 RPP30P78346 268 aaKnown RBP11.37□□□□□ -0.59
ACTN1-217ENST00000556203 IFITM3Q01628 133 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 ID3Q02535 119 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 OR4D5Q8NGN0 318 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 ST8SIA2Q92186 375 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 SRD5A3Q9H8P0 318 aa11.37□□□□□ -0.59
ACTN1-217ENST00000556203 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 NPPCP23582 126 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-217ENST00000556203 YPEL3P61236 119 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-217ENST00000556203 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
ACTN1-217ENST00000556203 IAH1Q2TAA2 248 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-217ENST00000556203 SPANXN5Q5MJ07 72 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 ZNF431Q8TF32 576 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-217ENST00000556203 Q8WTZ3 238 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 METTL26Q96S19 204 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 VSIRQ9H7M9 311 aa11.36□□□□□ -0.59
ACTN1-217ENST00000556203 H3BP45 60 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 SSSCA1O60232 199 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 SCGB1D2O95969 90 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 GAMTQ14353 236 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 HAGHQ16775 308 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 LILRB2Q8N423 598 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 ZMAT4Q9H898 229 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 GSKIPQ9P0R6 139 aa11.35□□□□□ -0.59
ACTN1-217ENST00000556203 IGKV3-7A0A075B6H7 116 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 RBMY1BA6NDE4 496 aaKnown RBP11.34□□□□□ -0.59
ACTN1-217ENST00000556203 RBMY1EA6NEQ0 496 aaKnown RBP11.34□□□□□ -0.59
ACTN1-217ENST00000556203 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 CCSO14618 274 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 RBMY1DP0C7P1 496 aaKnown RBP11.34□□□□□ -0.59
ACTN1-217ENST00000556203 RD3LP0DJH9 198 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 TFPI2P48307 235 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 LINC00322Q6ZN03 302 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-217ENST00000556203 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 ZBTB8BQ8NAP8 495 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-217ENST00000556203 TM2D3Q9BRN9 247 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 UBQLN2Q9UHD9 624 aa11.34□□□□□ -0.59
ACTN1-217ENST00000556203 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
ACTN1-217ENST00000556203 A0A1W2PS18 150 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 ZFP92A6NM28 416 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 DFFBO76075 338 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 TOMM40O96008 361 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 IL4P05112 153 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 CRYBB3P26998 211 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 GBGT1Q8N5D6 347 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-217ENST00000556203 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
ACTN1-217ENST00000556203 RCHY1Q96PM5 261 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 PSENENQ9NZ42 101 aa11.33□□□□□ -0.6
ACTN1-217ENST00000556203 IGKV1D-37A0A075B6S9 117 aa11.32□□□□□ -0.6
ACTN1-217ENST00000556203 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
ACTN1-217ENST00000556203 CD5P06127 495 aa11.32□□□□□ -0.6
ACTN1-217ENST00000556203 PSG1P11464 419 aa11.32□□□□□ -0.6
ACTN1-217ENST00000556203 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
ACTN1-217ENST00000556203 USF2Q15853 346 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-217ENST00000556203 ODF3L2Q3SX64 289 aa11.32□□□□□ -0.6
ACTN1-217ENST00000556203 HUWE1Q7Z6Z7 4374 aaKnown RBP11.32□□□□□ -0.6
ACTN1-217ENST00000556203 C5orf51A6NDU8 294 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 MBPP02686 304 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-217ENST00000556203 IL5P05113 134 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 HNRNPCP07910 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
ACTN1-217ENST00000556203 P2RY1P47900 373 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 PAFAH1B2P68402 229 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 ZNF90Q03938 601 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 WFDC3Q8IUB2 231 aa11.31□□□□□ -0.6
ACTN1-217ENST00000556203 SMIM8Q96KF7 97 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms