RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 RHEBQ15382 184 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 CIARTQ8N365 385 aaPredicted RBP11.63□□□□□ -0.55
VPS33B-205ENST00000556096 OR1L4Q8NGR5 311 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 PFDN5Q99471 154 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 RASL11BQ9BPW5 248 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 NIPSNAP3BQ9BS92 247 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 TNFRSF19Q9NS68 423 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
VPS33B-205ENST00000556096 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 IGHV7-81A0A0B4J1V7 117 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 TRAV40A0A0B4J280 105 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 SMAD7O15105 426 aaKnown RBP11.63□□□□□ -0.55
VPS33B-205ENST00000556096 CLN5O75503 358 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 TAS2R45P59539 299 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 ZNF90Q03938 601 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 MIR17HGQ75NE6 70 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 TMEM37Q8WXS4 190 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 TVP23CQ96ET8 276 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 FAM103A1Q9BTL3 118 aaKnown RBP11.63□□□□□ -0.55
VPS33B-205ENST00000556096 HIF1ANQ9NWT6 349 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
VPS33B-205ENST00000556096 NUPL2O15504 423 aaKnown RBP11.62□□□□□ -0.55
VPS33B-205ENST00000556096 NDPQ00604 133 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 TMEM88Q6PEY1 159 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 PRSS57Q6UWY2 283 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 PQLC2Q6ZP29 291 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 OR4F5Q8NH21 305 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 OR4F4Q96R69 305 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 RPS10P5Q9NQ39 176 aa11.62□□□□□ -0.55
VPS33B-205ENST00000556096 CELSR1Q9NYQ6 3014 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 IGHV3OR16-10A0A075B7F0 116 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 C11orf94C9JXX5 98 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 K7EIM0 57 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 PDE6DO43924 150 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 C8orf88P0DMB2 117 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-205ENST00000556096 BPIFB3P59826 476 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 LOXL1Q08397 574 aaPredicted RBP11.61□□□□□ -0.55
VPS33B-205ENST00000556096 CBLN2Q8IUK8 224 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 SMCO4Q9NRQ5 59 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 TMEM167BQ9NRX6 74 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 TMA7Q9Y2S6 64 aaKnown RBP11.61□□□□□ -0.55
VPS33B-205ENST00000556096 ARL2-SNX15V9GYD0 113 aa11.61□□□□□ -0.55
VPS33B-205ENST00000556096 IGLV11-55A0A075B6I3 123 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 ELOA3CA0A087WX78 387 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-205ENST00000556096 COX7A2P2O60397 106 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 IGHV4-38-2P0DP08 117 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 PLP1P60201 277 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
VPS33B-205ENST00000556096 C10orf113Q5VZT2 155 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 BRD3OSQ6XYD6 125 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 RBM14Q96PK6 669 aaKnown RBP11.6□□□□□ -0.55
VPS33B-205ENST00000556096 FANCD2OSQ96PS1 177 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 C20orf24Q9BUV8 137 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 IGHV3-21A0A0B4J1V1 117 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 A0A0U1RQK1 487 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 F6UZH7 168 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 J3QLI3 93 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 IGLC1P0CG04 106 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 AKIRIN2Q53H80 203 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 PATE2Q6UY27 113 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 LURAP1LQ8IV03 231 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 SGMS2Q8NHU3 365 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
VPS33B-205ENST00000556096 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 B4DEV8 164 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 TSPAN4O14817 238 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 UBE2G2P60604 165 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 KLK9Q2XQG4 91 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 CST9LP1Q5W188 147 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 C5orf56Q8N8D9 126 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 TMEM68Q96MH6 324 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 THYN1Q9P016 225 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 ZANQ9Y493 2812 aa11.59□□□□□ -0.55
VPS33B-205ENST00000556096 FLNAP21333 2647 aaKnown RBP11.59□□□□□ -0.55
VPS33B-205ENST00000556096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.553e-7■■■■□ 21.5
VPS33B-205ENST00000556096 A0A087WWC5 75 aa11.58□□□□□ -0.56
VPS33B-205ENST00000556096 ATP5G3P48201 142 aa11.58□□□□□ -0.56
VPS33B-205ENST00000556096 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-205ENST00000556096 FAM167A-AS1Q96KT0 104 aa11.58□□□□□ -0.56
VPS33B-205ENST00000556096 ZNF48Q96MX3 618 aaPredicted RBP11.58□□□□□ -0.56
VPS33B-205ENST00000556096 HSPB9Q9BQS6 159 aa11.58□□□□□ -0.56
VPS33B-205ENST00000556096 NAT8Q9UHE5 227 aa11.58□□□□□ -0.56
VPS33B-205ENST00000556096 MOB4Q9Y3A3 225 aa11.58□□□□□ -0.56
VPS33B-205ENST00000556096 FABP1P07148 127 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 AKR1C3P42330 323 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 SSX3Q99909 188 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 SMIM7Q9BQ49 75 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 SLC25A2Q9BXI2 301 aa11.57□□□□□ -0.56
VPS33B-205ENST00000556096 PARLQ9H300 379 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms