RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
NPC2-208ENST00000556009 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
NPC2-208ENST00000556009 PINX1Q96BK5 328 aaKnown RBP12.98□□□□□ -0.33
NPC2-208ENST00000556009 MFFQ9GZY8 342 aa12.98□□□□□ -0.33
NPC2-208ENST00000556009 TMEM222Q9H0R3 208 aa12.98□□□□□ -0.33
NPC2-208ENST00000556009 C11orf68Q9H3H3 251 aaKnown RBP12.98□□□□□ -0.33
NPC2-208ENST00000556009 IGKV3-7A0A075B6H7 116 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 IGHV3OR16-13A0A075B7E8 117 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 IGHV3-74A0A0B4J1X5 117 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 TMEM50AO95807 157 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 PTTG1O95997 202 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 TMEM187Q14656 261 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 ZNF600Q6ZNG1 722 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
NPC2-208ENST00000556009 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 C11orf45Q8TAV5 145 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 GLYATL2Q8WU03 294 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 KRTAP17-1Q9BYP8 105 aa12.97□□□□□ -0.33
NPC2-208ENST00000556009 SFT2D2O95562 160 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 OR4E1P0C645 316 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 P0C879 139 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 ANXA3P12429 323 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 SNCAP37840 140 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 C4orf46Q504U0 113 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 LILRB2Q8N423 598 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 ST8SIA2Q92186 375 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 PRR13Q9NZ81 148 aa12.96□□□□□ -0.33
NPC2-208ENST00000556009 HERC2O95714 4834 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 A0A0B4J293 547 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 C9orf170A2RU37 121 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 CORTO00230 105 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 ST8SIA3O43173 380 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 ATG12O94817 140 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 IGKV1-5P01602 117 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 APOHP02749 345 aaPredicted RBP12.95□□□□□ -0.34
NPC2-208ENST00000556009 IZUMO4Q1ZYL8 232 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 RGS21Q2M5E4 152 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 LHFPL5Q8TAF8 219 aa12.95□□□□□ -0.34
NPC2-208ENST00000556009 PUS1Q9Y606 427 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPC2-208ENST00000556009 DNASE2O00115 360 aaPredicted RBP12.94□□□□□ -0.34
NPC2-208ENST00000556009 CDS2O95674 445 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 IFNA4P05014 189 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■■■■■ 29.6
NPC2-208ENST00000556009 TCTAP57738 103 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 NANOS2P60321 138 aaKnown RBP12.94□□□□□ -0.34
NPC2-208ENST00000556009 DHRS2Q13268 280 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 SELENOHQ8IZQ5 122 aaKnown RBP12.94□□□□□ -0.34
NPC2-208ENST00000556009 RBPMSQ93062 196 aaKnown RBP12.94□□□□□ -0.34
NPC2-208ENST00000556009 MARVELD1Q9BSK0 173 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 TMEM231Q9H6L2 316 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 TMEM56-RWDD3S4R434 201 aa12.94□□□□□ -0.34
NPC2-208ENST00000556009 A0A1B0GU03 582 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 INMT-MINDY4F8WBC2 141 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 DEDDO75618 318 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 CA1P00915 261 aaPredicted RBP12.93□□□□□ -0.34
NPC2-208ENST00000556009 IFNA17P01571 189 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 NPPCP23582 126 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 DEFB131AP59861 70 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 SRPXP78539 464 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 SPINK9Q5DT21 86 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 TMEM268Q5VZI3 342 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 LGI3Q8N145 548 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 SLC35G3Q8N808 338 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 AGRNO00468 2067 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 DNAH6Q9C0G6 4158 aa12.93□□□□□ -0.34
NPC2-208ENST00000556009 A0A1W2PS18 150 aa12.92□□□□□ -0.34
NPC2-208ENST00000556009 CLN5O75503 358 aa12.92□□□□□ -0.34
NPC2-208ENST00000556009 IL5P05113 134 aa12.92□□□□□ -0.34
NPC2-208ENST00000556009 RNASE2P10153 161 aaKnown RBP12.92□□□□□ -0.34
NPC2-208ENST00000556009 AKR1C2P52895 323 aa12.92□□□□□ -0.34
NPC2-208ENST00000556009 OR4X1Q8NH49 305 aa12.92□□□□□ -0.34
NPC2-208ENST00000556009 SEC22CQ9BRL7 303 aa12.92□□□□□ -0.34
NPC2-208ENST00000556009 IGHV3-66A0A0C4DH42 116 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
NPC2-208ENST00000556009 BSXQ3C1V8 233 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 TMEM41BQ5BJD5 291 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 LEMD1Q68G75 181 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 FAM24BQ8N5W8 94 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 RNASE11Q8TAA1 199 aaKnown RBP12.91□□□□□ -0.34
NPC2-208ENST00000556009 ZNF431Q8TF32 576 aaPredicted RBP12.91□□□□□ -0.34
NPC2-208ENST00000556009 RRNAD1Q96FB5 475 aaKnown RBP12.91□□□□□ -0.34
NPC2-208ENST00000556009 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 PDCD10Q9BUL8 212 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 HRH4Q9H3N8 390 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 FBXL17Q9UF56 701 aa12.91□□□□□ -0.34
NPC2-208ENST00000556009 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 K7EQG2 157 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 CRYBB3P26998 211 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 AARDQ4LEZ3 155 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 LYZL2Q7Z4W2 148 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 STHQ8IWL8 128 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 LRTM2Q8N967 370 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 COQ8AQ8NI60 647 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 C2CD4CQ8TF44 421 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 MITD1Q8WV92 249 aa12.9□□□□□ -0.34
NPC2-208ENST00000556009 FNDC4Q9H6D8 234 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms