RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 CCL13Q99616 98 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 NIT2Q9NQR4 276 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 TAAR3PQ9P1P4 343 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 NAT8BQ9UHF3 227 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 DNAJC12Q9UKB3 198 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 THOC2Q8NI27 1593 aaKnown RBP2.48□□□□□ -2.01
LINC00643-204ENST00000555934 EFCAB5A4FU69 1503 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 THSD7AQ9UPZ6 1657 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 CFTRP13569 1480 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 HECW1Q76N89 1606 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 A0A1B0GW64 132 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 C20orf202A1L168 122 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 J3QRK9 145 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 SMIM10L2AP0DMW4 78 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 SMIM10L2BP0DMW5 78 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 CCR2P41597 374 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 LPAR6P43657 344 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 PDGFRLQ15198 375 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 ZNF181Q2M3W8 571 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 Q6Q795 121 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 RASL11AQ6T310 242 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 CROCCP2Q86T23 111 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 PDZD9Q8IXQ8 264 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 TCTE3Q8IZS6 198 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 C11orf68Q9H3H3 251 aaKnown RBP2.47□□□□□ -2.01
LINC00643-204ENST00000555934 FBXL12Q9NXK8 326 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 TVP23BQ9NYZ1 205 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 AMMECR1Q9Y4X0 333 aaPredicted RBP2.47□□□□□ -2.01
LINC00643-204ENST00000555934 HSPE1-MOB4S4R3N1 261 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 OVOS2A0A0G2JMS6 1433 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 TECPR2O15040 1411 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 CEP170Q5SW79 1584 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 CFAP43Q8NDM7 1665 aa2.47□□□□□ -2.01
LINC00643-204ENST00000555934 XIRP1Q702N8 1843 aaKnown RBP2.47□□□□□ -2.01
LINC00643-204ENST00000555934 TRPM6Q9BX84 2022 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 TIAM1Q13009 1591 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 REREQ9P2R6 1566 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 TRAV5A0A0B4J249 113 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 A8MUN3 132 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 FABP5P3A8MUU1 101 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 C17orf98A8MV24 154 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 A8MWP6 167 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 H7BYZ3 331 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 LST1O00453 97 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 COX7A2LO14548 114 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 OVOL1O14753 267 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 IGLV3-27P01718 113 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 BCL2P10415 239 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 S100A11P31949 105 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 CA7P43166 264 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 RPS25P62851 125 aaKnown RBP2.46□□□□□ -2.02
LINC00643-204ENST00000555934 RELAQ04206 551 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 SLC38A11Q08AI6 406 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 FOXF1Q12946 379 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 LYRM7Q5U5X0 104 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 FKBP1CQ5VVH2 108 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 GLT8D1Q68CQ7 371 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 ZNF322Q6U7Q0 402 aaPredicted RBP2.46□□□□□ -2.02
LINC00643-204ENST00000555934 C1orf174Q8IYL3 243 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 SLC22A24Q8N4F4 322 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 OR4E2Q8NGC2 313 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 OR10P1Q8NGE3 313 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 OR51T1Q8NGJ9 327 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 MRPL30Q8TCC3 161 aaKnown RBP2.46□□□□□ -2.02
LINC00643-204ENST00000555934 OR2J1Q9GZK6 312 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 OR8D2Q9GZM6 311 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 IMUPQ9GZP8 106 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 WDR61Q9GZS3 305 aaKnown RBP2.46□□□□□ -2.02
LINC00643-204ENST00000555934 AK3Q9UIJ7 227 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 HS3ST2Q9Y278 367 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 ATAD5Q96QE3 1844 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 MAPKBP1O60336 1514 aa2.46□□□□□ -2.02
LINC00643-204ENST00000555934 FYCO1Q9BQS8 1478 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 ARHGAP35Q9NRY4 1499 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 DOCK5Q9H7D0 1870 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 ERBINQ96RT1 1412 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 TRBV20OR9-2A0A075B6H5 130 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 TRAV9-1A0A075B6T8 112 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 UQCRHLA0A096LP55 91 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 TRDV1A0A1B0GX56 115 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 DHRS12A0PJE2 317 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 DPRXA6NFQ7 191 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 DPM2O94777 84 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 UQCRHP07919 91 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 DAPP51397 102 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 FKBP1AP62942 108 aaKnown RBP2.45□□□□□ -2.02
LINC00643-204ENST00000555934 PPP3R1P63098 170 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 GLYATL3Q5SZD4 288 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 PRADC1Q9BSG0 188 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 RTL8AQ9BWD3 113 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 ZNF471Q9BX82 626 aaPredicted RBP2.45□□□□□ -2.02
LINC00643-204ENST00000555934 FAIMQ9NVQ4 179 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 OR5AC2Q9NZP5 309 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 PCTPQ9UKL6 214 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 TNFSF18Q9UNG2 199 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 CUX1P39880 1505 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 ADAMTSL1Q8N6G6 1762 aa2.45□□□□□ -2.02
LINC00643-204ENST00000555934 CCDC18Q5T9S5 1454 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms