RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TPT1P13693 172 aaKnown RBP8.57□□□□□ -1.04
TMEM260-208ENST00000555905 OR10J1P30954 320 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 FCGR2BP31994 310 aaPredicted RBP8.57□□□□□ -1.04
TMEM260-208ENST00000555905 PROK1P58294 105 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 FAM209BQ5JX69 171 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 ZNF709Q8N972 641 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 THAP8Q8NA92 274 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 MRPL36Q9P0J6 103 aaKnown RBP8.57□□□□□ -1.04
TMEM260-208ENST00000555905 WDR83OSQ9Y284 106 aa8.57□□□□□ -1.04
TMEM260-208ENST00000555905 OR2T8A6NH00 312 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 C17orf112F2Z3M2 114 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 IGHV3-11P01762 117 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 FABP1P07148 127 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 GPR183P32249 361 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 CAMLGP49069 296 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 CLEC19AQ6UXS0 136 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 BAP18Q8IXM2 172 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 ZNF491Q8N8L2 437 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 HSD17B11Q8NBQ5 300 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 STOML3Q8TAV4 291 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 MYOZ3Q8TDC0 251 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 WIPF2Q8TF74 440 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-208ENST00000555905 GNPNAT1Q96EK6 184 aaPredicted RBP8.56□□□□□ -1.04
TMEM260-208ENST00000555905 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 CCDC140Q96MF4 163 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 NPCDR1Q9BY65 106 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 KCNIP2Q9NS61 270 aa8.56□□□□□ -1.04
TMEM260-208ENST00000555905 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
TMEM260-208ENST00000555905 IGKV1OR2-108A0A075B7D4 117 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.55□□□□□ -1.04
TMEM260-208ENST00000555905 TCRBV4S1A1TA0A5B7 111 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 AGPAT2O15120 278 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 NUPL2O15504 423 aaKnown RBP8.55□□□□□ -1.04
TMEM260-208ENST00000555905 CLEC3BP05452 202 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 IGLC1P0CG04 106 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 KIAA0141Q14154 515 aaPredicted RBP8.55□□□□□ -1.04
TMEM260-208ENST00000555905 EIF5AL1Q6IS14 154 aaKnown RBP8.55□□□□□ -1.04
TMEM260-208ENST00000555905 ZNF343Q6P1L6 599 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 SPSB3Q6PJ21 355 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 ST8SIA2Q92186 375 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 TRGV9Q99603 122 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 MGST2Q99735 147 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 GINS3Q9BRX5 216 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 ARV1Q9H2C2 271 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 GNB4Q9HAV0 340 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 C2CD3Q4AC94 2353 aa8.55□□□□□ -1.04
TMEM260-208ENST00000555905 JMJD1CQ15652 2540 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 ANKRD34BA5PLL1 514 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 F8W735 103 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-208ENST00000555905 TGOLN2O43493 480 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 LGALS1P09382 135 aaKnown RBP8.54□□□□□ -1.04
TMEM260-208ENST00000555905 CD28P10747 220 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 ATP6V0CP27449 155 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 ARL3P36405 182 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 CDX1P47902 265 aaPredicted RBP8.54□□□□□ -1.04
TMEM260-208ENST00000555905 SELENOTP62341 195 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 RUNX1Q01196 453 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 TIGITQ495A1 244 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 TCTEX1D4Q5JR98 221 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 CYP2G1PQ6ZSU1 146 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 PRIMA1Q86XR5 153 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 OR5B12Q96R08 314 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 RSG1Q9BU20 258 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 GGTLC1Q9BX51 225 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 PEF1Q9UBV8 284 aaKnown RBP8.54□□□□□ -1.04
TMEM260-208ENST00000555905 TIMM9Q9Y5J7 89 aa8.54□□□□□ -1.04
TMEM260-208ENST00000555905 IGKV1D-37A0A075B6S9 117 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 NUDT19A8MXV4 375 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 IGKV1-17P01599 117 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 CTSGP08311 255 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 RD3LP0DJH9 198 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-208ENST00000555905 RPL29P47914 159 aaKnown RBP8.53□□□□□ -1.04
TMEM260-208ENST00000555905 YPEL3P61236 119 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-208ENST00000555905 ZNF90Q03938 601 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 RELQ04864 619 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-208ENST00000555905 ZNF616Q08AN1 781 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 KRTAP24-1Q3LI83 254 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 C11orf44Q8N8P7 122 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 C4orf3Q8WVX3 66 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 PHYHIPLQ96FC7 376 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 PSMG3Q9BT73 122 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-208ENST00000555905 SH3BGRL3Q9H299 93 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 SLC25A32Q9H2D1 315 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 SLC45A2Q9UMX9 530 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 TSSC4Q9Y5U2 329 aaPredicted RBP8.53□□□□□ -1.04
TMEM260-208ENST00000555905 PXMP4Q9Y6I8 212 aa8.53□□□□□ -1.04
TMEM260-208ENST00000555905 PPP5D1E7EU14 171 aa8.52□□□□□ -1.05
TMEM260-208ENST00000555905 GGCTO75223 188 aaKnown RBP8.52□□□□□ -1.05
TMEM260-208ENST00000555905 TSPAN15O95858 294 aa8.52□□□□□ -1.05
TMEM260-208ENST00000555905 TOMM40O96008 361 aa8.52□□□□□ -1.05
TMEM260-208ENST00000555905 CFDP00746 253 aaPredicted RBP8.52□□□□□ -1.05
TMEM260-208ENST00000555905 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
TMEM260-208ENST00000555905 SPP1P10451 314 aa8.52□□□□□ -1.05
TMEM260-208ENST00000555905 B2MP61769 119 aa8.52□□□□□ -1.05
TMEM260-208ENST00000555905 SERF2P84101 59 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms