RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 TOMM20LQ6UXN7 152 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 TMEM61Q8N0U2 210 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 GRAMD2BQ96HH9 432 aa17.26■□□□□ 0.35
CDKN3-208ENST00000555837 PAIP2BQ9ULR5 123 aaKnown RBP17.26■□□□□ 0.35
CDKN3-208ENST00000555837 STRAPQ9Y3F4 350 aaKnown RBP17.26■□□□□ 0.35
CDKN3-208ENST00000555837 IZUMO1RA6ND01 250 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 OR4C46A6NHA9 309 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 ZNF785A8K8V0 405 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 TSPAN4O14817 238 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 EIF2B2P49770 351 aaKnown RBP17.25■□□□□ 0.35
CDKN3-208ENST00000555837 Q8N1Y9 231 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 RAB40CQ96S21 281 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 RHPN1-AS1Q9BWJ2 59 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 TBC1D24Q9ULP9 559 aa17.25■□□□□ 0.35
CDKN3-208ENST00000555837 IGHV4-30-4P0DP06 118 aa17.24■□□□□ 0.35
CDKN3-208ENST00000555837 IAPPP10997 89 aa17.24■□□□□ 0.35
CDKN3-208ENST00000555837 NUP62P37198 522 aaPredicted RBP17.24■□□□□ 0.35
CDKN3-208ENST00000555837 C12orf45Q8N5I9 185 aaPredicted RBP17.24■□□□□ 0.35
CDKN3-208ENST00000555837 WDR89Q96FK6 387 aaPredicted RBP17.24■□□□□ 0.35
CDKN3-208ENST00000555837 ACY3Q96HD9 319 aa17.24■□□□□ 0.35
CDKN3-208ENST00000555837 ZMAT4Q9H898 229 aa17.24■□□□□ 0.35
CDKN3-208ENST00000555837 PRAF2O60831 178 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 SCAF4O95104 1147 aaKnown RBP17.23■□□□□ 0.35
CDKN3-208ENST00000555837 IL5P05113 134 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 FRMD6-AS1P0C7T7 363 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 IGLC1P0CG04 106 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 S100A7P31151 101 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 MLANAQ16655 118 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 NPIPB3Q92617 1050 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 MAGT1Q9H0U3 335 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 TGP01266 2768 aa17.23■□□□□ 0.35
CDKN3-208ENST00000555837 CHEK1O14757 476 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 CFDP00746 253 aaPredicted RBP17.22■□□□□ 0.35
CDKN3-208ENST00000555837 RD3LP0DJH9 198 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 TAS2R30P59541 319 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 SPANXN5Q5MJ07 72 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 OR4D5Q8NGN0 318 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 TMEM170AQ8WVE7 144 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 GSKIPQ9P0R6 139 aa17.22■□□□□ 0.35
CDKN3-208ENST00000555837 PRKDCP78527 4128 aaKnown RBP17.21■□□□□ 0.35
CDKN3-208ENST00000555837 IGHV3OR16-8A0A075B7F1 116 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 ZFP92A6NM28 416 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 OR11H12B2RN74 326 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 ZNF207O43670 478 aaKnown RBP17.21■□□□□ 0.35
CDKN3-208ENST00000555837 IGKV1-17P01599 117 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 TIGITQ495A1 244 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 ZBTB8BQ8NAP8 495 aaPredicted RBP17.21■□□□□ 0.35
CDKN3-208ENST00000555837 SMIM8Q96KF7 97 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 ZFAND3Q9H8U3 227 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 PSENENQ9NZ42 101 aa17.21■□□□□ 0.35
CDKN3-208ENST00000555837 C5orf51A6NDU8 294 aa17.2■□□□□ 0.34
CDKN3-208ENST00000555837 SCGB1D2O95969 90 aa17.2■□□□□ 0.34
CDKN3-208ENST00000555837 TOMM40O96008 361 aa17.2■□□□□ 0.34
CDKN3-208ENST00000555837 PVALBP20472 110 aaPredicted RBP17.2■□□□□ 0.34
CDKN3-208ENST00000555837 EDN2P20800 178 aa17.2■□□□□ 0.34
CDKN3-208ENST00000555837 FAM110AQ9BQ89 295 aa17.2■□□□□ 0.34
CDKN3-208ENST00000555837 C19orf73Q9NVV2 129 aa17.2■□□□□ 0.34
CDKN3-208ENST00000555837 FAM25EA8MYX2 175 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 L7N2F9 121 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 SSSCA1O60232 199 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 AP2S1P53680 142 aaPredicted RBP17.19■□□□□ 0.34
CDKN3-208ENST00000555837 POLR2GP62487 172 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDKN3-208ENST00000555837 VAMP2P63027 116 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 GSG1LQ6UXU4 331 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 OR51G1Q8NGK1 321 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 VSIRQ9H7M9 311 aa17.19■□□□□ 0.34
CDKN3-208ENST00000555837 MRPL36Q9P0J6 103 aaKnown RBP17.19■□□□□ 0.34
CDKN3-208ENST00000555837 SNRPGP15A8MWD9 76 aa17.18■□□□□ 0.34
CDKN3-208ENST00000555837 TSC22D2O75157 780 aa17.18■□□□□ 0.34
CDKN3-208ENST00000555837 CRYBB3P26998 211 aa17.18■□□□□ 0.34
CDKN3-208ENST00000555837 GAMTQ14353 236 aa17.18■□□□□ 0.34
CDKN3-208ENST00000555837 SEC22CQ9BRL7 303 aa17.18■□□□□ 0.34
CDKN3-208ENST00000555837 TRAV2A0A0B4J234 112 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 HELTA6NFD8 242 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 MPTX1A8MV57 137 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 HNRNPCP07910 306 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDKN3-208ENST00000555837 RPL11P62913 178 aaKnown RBP17.17■□□□□ 0.34
CDKN3-208ENST00000555837 C2orf50Q96LR7 162 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 RNF2Q99496 336 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 RABAC1Q9UI14 185 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 U3KQK5 164 aa17.17■□□□□ 0.34
CDKN3-208ENST00000555837 INMT-MINDY4F8WBC2 141 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 DNASE2O00115 360 aaPredicted RBP17.16■□□□□ 0.34
CDKN3-208ENST00000555837 IL4P05112 153 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 CD7P09564 240 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 TCF24Q7RTU0 167 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 NRARPQ7Z6K4 114 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 OR10P1Q8NGE3 313 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 TRGV9Q99603 122 aa17.16■□□□□ 0.34
CDKN3-208ENST00000555837 AKR1C1Q04828 323 aa17.15■□□□□ 0.34
CDKN3-208ENST00000555837 OR8G2PQ6IF36 304 aa17.15■□□□□ 0.34
CDKN3-208ENST00000555837 S100A7AQ86SG5 101 aa17.15■□□□□ 0.34
CDKN3-208ENST00000555837 SRD5A3Q9H8P0 318 aa17.15■□□□□ 0.34
CDKN3-208ENST00000555837 FNDC10F2Z333 226 aa17.14■□□□□ 0.33
CDKN3-208ENST00000555837 H3BP45 60 aa17.14■□□□□ 0.33
CDKN3-208ENST00000555837 PSG1P11464 419 aa17.14■□□□□ 0.33
CDKN3-208ENST00000555837 CYCSP99999 105 aaKnown RBP17.14■□□□□ 0.33
CDKN3-208ENST00000555837 SBSPONQ8IVN8 264 aa17.14■□□□□ 0.33
CDKN3-208ENST00000555837 ASCL2Q99929 193 aa17.14■□□□□ 0.33
CDKN3-208ENST00000555837 MARVELD1Q9BSK0 173 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms