RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SLC25A4P12235 298 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 FAM90A2PQ658T7 463 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 VSIRQ9H7M9 311 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 TMED3Q9Y3Q3 217 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 U3KQ87 197 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 C9orf170A2RU37 121 aa15.25■□□□□ 0.03
VTI1B-205ENST00000555543 OR4C46A6NHA9 309 aa15.25■□□□□ 0.03
VTI1B-205ENST00000555543 SLC25A6P12236 298 aa15.25■□□□□ 0.03
VTI1B-205ENST00000555543 FAM110AQ9BQ89 295 aa15.25■□□□□ 0.03
VTI1B-205ENST00000555543 C7orf50Q9BRJ6 194 aaKnown RBP15.25■□□□□ 0.03
VTI1B-205ENST00000555543 IGKV3-7A0A075B6H7 116 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 TRAV30A0A087WSZ9 112 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 PLA2G10O15496 165 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 UPK1BO75841 260 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 IAPPP10997 89 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 ANXA7P20073 488 aaKnown RBP15.24■□□□□ 0.03
VTI1B-205ENST00000555543 OR10J1P30954 320 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 TFPI2P48307 235 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 DHRS2Q13268 280 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 GGNBP1Q5YKI7 109 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 NOXA1Q86UR1 476 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 OR1S2Q8NGQ3 325 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 NPIPB3Q92617 1050 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 ACY3Q96HD9 319 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 EDA2RQ9HAV5 297 aa15.24■□□□□ 0.03
VTI1B-205ENST00000555543 CENPXA8MT69 81 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 SCGB2A1O75556 95 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 ADAP1O75689 374 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 OR4E1P0C645 316 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 TCF24Q7RTU0 167 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 GBGT1Q8N5D6 347 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 GGTLC1Q9BX51 225 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 MAGT1Q9H0U3 335 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 STARD9Q9P2P6 4700 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 CSMD3Q7Z407 3707 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 RYR3Q15413 4870 aa15.23■□□□□ 0.03
VTI1B-205ENST00000555543 MPTX1A8MV57 137 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 FAM90A26D6RGX4 464 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 DFFBO76075 338 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 CRYBB3P26998 211 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 ETFRF1Q6IPR1 90 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 LYG2Q86SG7 212 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 MUC7Q8TAX7 377 aa15.22■□□□□ 0.03
VTI1B-205ENST00000555543 LOC102724200A0A096LPH7 203 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-205ENST00000555543 IFNA4P05014 189 aa15.21■□□□□ 0.03
VTI1B-205ENST00000555543 NPPCP23582 126 aa15.21■□□□□ 0.03
VTI1B-205ENST00000555543 BMI1P35226 326 aa15.21■□□□□ 0.03
VTI1B-205ENST00000555543 YPEL3P61236 119 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-205ENST00000555543 IFITM3Q01628 133 aa15.21■□□□□ 0.03
VTI1B-205ENST00000555543 METTL26Q96S19 204 aa15.21■□□□□ 0.03
VTI1B-205ENST00000555543 LYRM1O43325 122 aa15.2■□□□□ 0.02
VTI1B-205ENST00000555543 ZNF124Q15973 351 aa15.2■□□□□ 0.02
VTI1B-205ENST00000555543 APRG1Q8IVJ8 170 aa15.2■□□□□ 0.02
VTI1B-205ENST00000555543 C3orf84H3BNL1 204 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 SYNGR2O43760 224 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 ATP5IP56385 69 aaPredicted RBP15.19■□□□□ 0.02
VTI1B-205ENST00000555543 USF2Q15853 346 aaPredicted RBP15.19■□□□□ 0.02
VTI1B-205ENST00000555543 C4orf46Q504U0 113 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 COQ8AQ8NI60 647 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 Q8WTZ3 238 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 C20orf85Q9H1P6 137 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 MS4A6AQ9H2W1 248 aa15.19■□□□□ 0.02
VTI1B-205ENST00000555543 WRBO00258 174 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 MED6O75586 246 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 IL4P05112 153 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 CD5P06127 495 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 P2RY1P47900 373 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 GAMTQ14353 236 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 WFDC3Q8IUB2 231 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 FAM24BQ8N5W8 94 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 TMEM231Q9H6L2 316 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 MAP6D1Q9H9H5 199 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 U3KQE9 123 aa15.18■□□□□ 0.02
VTI1B-205ENST00000555543 IGKV1D-37A0A075B6S9 117 aa15.17■□□□□ 0.02
VTI1B-205ENST00000555543 TOMM40O96008 361 aa15.17■□□□□ 0.02
VTI1B-205ENST00000555543 GPX4P36969 197 aaPredicted RBP15.17■□□□□ 0.02
VTI1B-205ENST00000555543 RPL11P62913 178 aaKnown RBP15.17■□□□□ 0.02
VTI1B-205ENST00000555543 PAIP2BQ9ULR5 123 aaKnown RBP15.17■□□□□ 0.02
VTI1B-205ENST00000555543 DYNC2H1Q8NCM8 4307 aaKnown RBP15.16■□□□□ 0.02
VTI1B-205ENST00000555543 A0A1W2PS18 150 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 PRSS46E5RG02 174 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 H3BP45 60 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 RD3LP0DJH9 198 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 PSG1P11464 419 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 PAFAH1B2P68402 229 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 ID3Q02535 119 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 CASC10Q5T4H9 136 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 OR4D5Q8NGN0 318 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 SLC35E1Q96K37 410 aa15.16■□□□□ 0.02
VTI1B-205ENST00000555543 CIB3Q96Q77 187 aaPredicted RBP15.16■□□□□ 0.02
VTI1B-205ENST00000555543 DNASE2O00115 360 aaPredicted RBP15.15■□□□□ 0.02
VTI1B-205ENST00000555543 TCRBP04435 133 aa15.15■□□□□ 0.02
VTI1B-205ENST00000555543 HNRNPCP07910 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
VTI1B-205ENST00000555543 RPL35AP18077 110 aaKnown RBP15.15■□□□□ 0.02
VTI1B-205ENST00000555543 POLR2GP62487 172 aaKnown RBP eCLIP15.15■□□□□ 0.02
VTI1B-205ENST00000555543 RAB11AP62491 216 aa15.15■□□□□ 0.02
VTI1B-205ENST00000555543 ZNF90Q03938 601 aa15.15■□□□□ 0.02
VTI1B-205ENST00000555543 MITD1Q8WV92 249 aa15.15■□□□□ 0.02
VTI1B-205ENST00000555543 OVOL2Q9BRP0 275 aa15.15■□□□□ 0.02
VTI1B-205ENST00000555543 RABAC1Q9UI14 185 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms