RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 RALGAPA2Q2PPJ7 1873 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 CEP192Q8TEP8 1941 aa-0.38□□□□□ -2.47
SNX6-204ENST00000555541 OTOGQ6ZRI0 2925 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 DPRXA6NFQ7 191 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 ZNF727A8MUV8 499 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 F8W1H4 67 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 BUB1B-PAK6H3BSN5 160 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 DHFRP00374 187 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 CCL4P13236 92 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 BLVRAP53004 296 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 SPATA45Q537H7 98 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 OR52R1Q8NGF1 315 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 OR51D1Q8NGF3 324 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 PLAC4Q8WY50 150 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 TOMM6Q96B49 74 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 TP53RKQ96S44 253 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 C11orf68Q9H3H3 251 aaKnown RBP-0.39□□□□□ -2.47
SNX6-204ENST00000555541 C3orf18Q9UK00 162 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 UTP11Q9Y3A2 253 aaKnown RBP-0.39□□□□□ -2.47
SNX6-204ENST00000555541 RNF11Q9Y3C5 154 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.39□□□□□ -2.47
SNX6-204ENST00000555541 CCDC88AQ3V6T2 1871 aa-0.39□□□□□ -2.47
SNX6-204ENST00000555541 CITO14578 2027 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 DOCK3Q8IZD9 2030 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 MUC12Q9UKN1 5478 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 C7orf71A4D174 169 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 NDUFS6O75380 124 aaKnown RBP-0.4□□□□□ -2.47
SNX6-204ENST00000555541 GADD45GO95257 159 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 OR4E1P0C645 316 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 MYL12AP19105 171 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 CDC42P60953 191 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 NAA20P61599 178 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 RHOBP62745 196 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 CLVS2Q5SYC1 327 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 GLIPR1L1Q6UWM5 242 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 OR8D4Q8NGM9 314 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 GPER1Q99527 375 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 C7orf50Q9BRJ6 194 aaKnown RBP-0.4□□□□□ -2.47
SNX6-204ENST00000555541 UPF3BQ9BZI7 483 aaKnown RBP-0.4□□□□□ -2.47
SNX6-204ENST00000555541 OR52A5Q9H2C5 316 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 BCL2L10Q9HD36 194 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 CMTM6Q9NX76 183 aa-0.4□□□□□ -2.47
SNX6-204ENST00000555541 MAST2Q6P0Q8 1798 aa-0.41□□□□□ -2.47
SNX6-204ENST00000555541 EXOC1LA0A1B0GW35 172 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 GPR31O00270 319 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 YKT6O15498 198 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 PPYP01298 95 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 HLA-DRB1P01911 266 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 OCMP0CE72 109 aaPredicted RBP-0.41□□□□□ -2.48
SNX6-204ENST00000555541 CASP1P29466 404 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 ANP32AP39687 249 aaKnown RBP-0.41□□□□□ -2.48
SNX6-204ENST00000555541 MAGEA2P43356 314 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 YPEL3P61236 119 aaPredicted RBP-0.41□□□□□ -2.48
SNX6-204ENST00000555541 PMAIP1Q13794 54 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 HIST2H3PS2Q5TEC6 136 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 AADACL4Q5VUY2 407 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 LYG2Q86SG7 212 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 PRR15Q8IV56 129 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 ANKRD29Q8N6D5 301 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 GDPD1Q8N9F7 314 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 OR2T10Q8NGZ9 312 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 HIST1H2BLQ99880 126 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 NIPSNAP1Q9BPW8 284 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 PRTFDC1Q9NRG1 225 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 UBAP1Q9NZ09 502 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 FLNCQ14315 2725 aa-0.41□□□□□ -2.48
SNX6-204ENST00000555541 CACNA1CQ13936 2221 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 TRAV10A0A0B4J240 114 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 FABP12A6NFH5 140 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 C1orf196B1AJZ1 125 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 GOLGA8KD6RF30 607 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 JMJD7-PLA2G4BH0Y9G9 81 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 CRYZL1O95825 349 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 APOEP02649 317 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 CD14P08571 375 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 RPS12P25398 132 aaKnown RBP-0.42□□□□□ -2.48
SNX6-204ENST00000555541 DEFA1P59665 94 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 TSNQ15631 228 aaKnown RBP-0.42□□□□□ -2.48
SNX6-204ENST00000555541 C4orf22Q6V702 233 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 Q6ZQY7 126 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 ZNF431Q8TF32 576 aaPredicted RBP-0.42□□□□□ -2.48
SNX6-204ENST00000555541 C19orf60Q96EN9 201 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 OR51I1Q9H343 314 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 PLEKHJ1Q9NW61 149 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 PCTPQ9UKL6 214 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 TMEM56-RWDD3S4R434 201 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 KDM6AO15550 1401 aaPredicted RBP-0.42□□□□□ -2.48
SNX6-204ENST00000555541 TNS3Q68CZ2 1445 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 CELSR1Q9NYQ6 3014 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 SCN3AQ9NY46 2000 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 HMCN2Q8NDA2 5059 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 UBR5O95071 2799 aaPredicted RBP-0.42□□□□□ -2.48
SNX6-204ENST00000555541 EVC2Q86UK5 1308 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 ZDBF2Q9HCK1 2354 aa-0.42□□□□□ -2.48
SNX6-204ENST00000555541 CASP8AP2Q9UKL3 1982 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 BCL9O00512 1426 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 A0A087X0T9 212 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 ERICH2A1L162 156 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 EEF1E1-BLOC1S5C9J1V9 151 aa-0.43□□□□□ -2.48
SNX6-204ENST00000555541 CXCR6O00574 342 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms