RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RD3LP0DJH9 198 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 PRTN3P24158 256 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 ZFP36P26651 326 aaKnown RBP19.36■□□□□ 0.69
TMEM260-207ENST00000555497 C10orf113Q5VZT2 155 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 MRPL41Q8IXM3 137 aaKnown RBP19.36■□□□□ 0.69
TMEM260-207ENST00000555497 OR5AU1Q8NGC0 362 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 RNF5Q99942 180 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 UBTD1Q9HAC8 227 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 TNFRSF19Q9NS68 423 aa19.36■□□□□ 0.69
TMEM260-207ENST00000555497 PYYP10082 97 aa19.35■□□□□ 0.69
TMEM260-207ENST00000555497 C9orf152Q5JTZ5 239 aa19.35■□□□□ 0.69
TMEM260-207ENST00000555497 RNF2Q99496 336 aa19.35■□□□□ 0.69
TMEM260-207ENST00000555497 F11RQ9Y624 299 aaKnown RBP19.35■□□□□ 0.69
TMEM260-207ENST00000555497 SUMO1P63165 101 aaKnown RBP19.35■□□□□ 0.69
TMEM260-207ENST00000555497 ETFRF1Q6IPR1 90 aa19.35■□□□□ 0.69
TMEM260-207ENST00000555497 TEX38Q6PEX7 206 aa19.35■□□□□ 0.69
TMEM260-207ENST00000555497 MDFIC2A0A1B0GVS7 189 aa19.34■□□□□ 0.69
TMEM260-207ENST00000555497 PPP5D1E7EU14 171 aa19.34■□□□□ 0.69
TMEM260-207ENST00000555497 GPR6P46095 362 aaPredicted RBP19.34■□□□□ 0.69
TMEM260-207ENST00000555497 SELENOTP62341 195 aa19.34■□□□□ 0.69
TMEM260-207ENST00000555497 PLGLAQ15195 96 aa19.34■□□□□ 0.69
TMEM260-207ENST00000555497 GSX1Q9H4S2 264 aaPredicted RBP19.34■□□□□ 0.69
TMEM260-207ENST00000555497 ASH1LQ9NR48 2969 aaKnown RBP19.34■□□□□ 0.69
TMEM260-207ENST00000555497 WNK2Q9Y3S1 2297 aa19.34■□□□□ 0.69
TMEM260-207ENST00000555497 C9JCJ5 164 aa19.33■□□□□ 0.69
TMEM260-207ENST00000555497 MMDQ15546 238 aa19.33■□□□□ 0.69
TMEM260-207ENST00000555497 TMEM116Q8NCL8 245 aa19.33■□□□□ 0.69
TMEM260-207ENST00000555497 OR1L4Q8NGR5 311 aa19.33■□□□□ 0.69
TMEM260-207ENST00000555497 EAF1Q96JC9 268 aaPredicted RBP19.33■□□□□ 0.69
TMEM260-207ENST00000555497 AKAP6Q13023 2319 aa19.33■□□□□ 0.68
TMEM260-207ENST00000555497 A6NNC1 897 aa19.33■□□□□ 0.68
TMEM260-207ENST00000555497 PPP1R2P9O14990 202 aa19.33■□□□□ 0.68
TMEM260-207ENST00000555497 UBE2L3P68036 154 aaKnown RBP19.33■□□□□ 0.68
TMEM260-207ENST00000555497 A0A1W2PRE2 83 aa19.32■□□□□ 0.68
TMEM260-207ENST00000555497 CDPF1Q6NVV7 123 aa19.32■□□□□ 0.68
TMEM260-207ENST00000555497 TRGV9Q99603 122 aa19.32■□□□□ 0.68
TMEM260-207ENST00000555497 HELTA6NFD8 242 aa19.32■□□□□ 0.68
TMEM260-207ENST00000555497 KCNIP4Q6PIL6 250 aa19.32■□□□□ 0.68
TMEM260-207ENST00000555497 OR10G8Q8NGN5 311 aa19.32■□□□□ 0.68
TMEM260-207ENST00000555497 TYMSP04818 313 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 DYNAPQ8N1N2 210 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 SGMS2Q8NHU3 365 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 CACNA1AO00555 2505 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 ELOA3CA0A087WX78 387 aaPredicted RBP19.31■□□□□ 0.68
TMEM260-207ENST00000555497 ORM2P19652 201 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 BPIFB3P59826 476 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 OR5I1Q13606 314 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 CENPWQ5EE01 88 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 LINC00305Q7Z4B0 112 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 VMO1Q7Z5L0 202 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 OR10D4PQ8NGN7 298 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 PAXXQ9BUH6 204 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 LY96Q9Y6Y9 160 aa19.31■□□□□ 0.68
TMEM260-207ENST00000555497 SNRPCP09234 159 aaKnown RBP19.3■□□□□ 0.68
TMEM260-207ENST00000555497 HIST1H1BP16401 226 aaKnown RBP19.3■□□□□ 0.68
TMEM260-207ENST00000555497 DEFA6Q01524 100 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 PAX2Q02962 417 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 FOXL1Q12952 345 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 PDZD11Q5EBL8 140 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 HIST3H2BBQ8N257 126 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 IMMP2LQ96T52 175 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 PRDM13Q9H4Q3 707 aa19.3■□□□□ 0.68
TMEM260-207ENST00000555497 NBR2O15453 112 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 CEACAM3P40198 252 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 SSX2Q16385 188 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 DNLZQ5SXM8 178 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 OR1B1Q8NGR6 318 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 GPR61Q9BZJ8 451 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 SLC17A3O00476 420 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 CNIH1O95406 144 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 FXYD5Q96DB9 178 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 WNT10AQ9GZT5 417 aa19.29■□□□□ 0.68
TMEM260-207ENST00000555497 A0A0U1RQK1 487 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 I3L2K1 104 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 CORTO00230 105 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 GNG4P50150 75 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 LCN2P80188 198 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 C1orf122Q6ZSJ8 110 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 NPBQ8NG41 125 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 NDUFA3O95167 84 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 ACTL10Q5JWF8 245 aa19.28■□□□□ 0.68
TMEM260-207ENST00000555497 ZNF320A2RRD8 509 aa19.27■□□□□ 0.68
TMEM260-207ENST00000555497 C22orf15Q8WYQ4 148 aa19.27■□□□□ 0.68
TMEM260-207ENST00000555497 FAM103A1Q9BTL3 118 aaKnown RBP19.27■□□□□ 0.68
TMEM260-207ENST00000555497 HOXB4P17483 251 aaPredicted RBP19.27■□□□□ 0.67
TMEM260-207ENST00000555497 EFNA4P52798 201 aa19.27■□□□□ 0.67
TMEM260-207ENST00000555497 IGLV2-8P01709 118 aa19.26■□□□□ 0.67
TMEM260-207ENST00000555497 HES1Q14469 280 aa19.26■□□□□ 0.67
TMEM260-207ENST00000555497 LINC00479Q96M42 142 aa19.26■□□□□ 0.67
TMEM260-207ENST00000555497 RPL15P61313 204 aaKnown RBP19.25■□□□□ 0.67
TMEM260-207ENST00000555497 KIR3DL3Q8N743 410 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 IGLC1P0CG04 106 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 FXYD3Q14802 87 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 ZNF329Q86UD4 541 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 PERPQ96FX8 193 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 IGF2BP2-AS1Q96M15 143 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 SIRPDQ9H106 197 aa19.25■□□□□ 0.67
TMEM260-207ENST00000555497 CSMD1Q96PZ7 3565 aa19.24■□□□□ 0.67
TMEM260-207ENST00000555497 SRSF8Q9BRL6 282 aaKnown RBP19.24■□□□□ 0.67
TMEM260-207ENST00000555497 C5orf64Q2M2E5 130 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms