RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ZNF576Q9H609 170 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 OSTCQ9NRP0 149 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 THYN1Q9P016 225 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 MRPL36Q9P0J6 103 aaKnown RBP7.24□□□□□ -1.25
SYNE2-217ENST00000555022 B4GALT7Q9UBV7 327 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 C9JCJ5 164 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 NPIPB11E5RHQ5 1161 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 E7EUB6 86 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 H0YJW9 148 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 HTR1DP28221 377 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 CXCL12P48061 93 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 MEOX1P50221 254 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 NHLH1Q02575 133 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 SMAGPQ0VAQ4 97 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 ZNF146Q15072 292 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 RUSC1-AS1Q66K80 236 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 LINC00596Q86U02 117 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 SAP25Q8TEE9 199 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 RAB1CQ92928 201 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 C18orf15Q96N68 181 aa7.24□□□□□ -1.25
SYNE2-217ENST00000555022 PIGBOS1A0A0B4J2F0 54 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 K7ERJ3 54 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 AREGP15514 252 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 MEF2CQ06413 473 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 C11orf53Q8IXP5 236 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 TDHQ8IZJ6 230 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 ITLN1Q8WWA0 313 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 ZNF430Q9H8G1 570 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 IDI2-AS1Q9NZ38 188 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 PEX7O00628 323 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 ENSAO43768 121 aaKnown RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 OR5AL1P0C617 328 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 C8orf88P0DMB2 117 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 HOXC12P31275 282 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 SFTA2Q6UW10 78 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 PRNTQ86SH4 94 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 PERPQ96FX8 193 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 FAM173AQ9BQD7 235 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 IFI27L2Q9H2X8 130 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 TMEM167BQ9NRX6 74 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 SMIM27A0A1W2PRY6 76 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 PRSS46E5RG02 174 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 MPDU1O75352 247 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 GPR183P32249 361 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 HSPE1P61604 102 aaKnown RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 LOXL1Q08397 574 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 MRPL49Q13405 166 aaKnown RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 EIF4EBP1Q13541 118 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 SMIM21Q3B7S5 101 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 CT45A1Q5HYN5 189 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 CT45A3Q8NHU0 189 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 DAZAP1Q96EP5 407 aaKnown RBP7.23□□□□□ -1.25
SYNE2-217ENST00000555022 CCL13Q99616 98 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 CSTL1Q9H114 145 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 HES4Q9HCC6 221 aa7.23□□□□□ -1.25
SYNE2-217ENST00000555022 TRBV9A0A0B4J1U6 114 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 K7ERU9 68 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 IGHV1-2P23083 117 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 DIAPH2-AS1Q14236 149 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 LRRC10Q5BKY1 277 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 VWA1Q6PCB0 445 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 BPIFA4PQ86YQ2 179 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 Q8IYB0 196 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 FAM216BQ8N7L0 139 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 OR4S2Q8NH73 311 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 TMEM191AQ9H0A3 160 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 IGKV1D-17A0A075B6S4 117 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-217ENST00000555022 C15orf61A6NNL5 157 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 C10orf142B7Z368 130 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 APOHP02749 345 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-217ENST00000555022 FAM87AP0C7U9 286 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 RTL8BQ17RB0 113 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 MRPL52Q86TS9 123 aaKnown RBP7.22□□□□□ -1.25
SYNE2-217ENST00000555022 EXOC3-AS1Q8N2X6 119 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 OR4A5Q8NH83 315 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 C11orf52Q96A22 123 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 IGF2BP2-AS1Q96M15 143 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 SLC25A2Q9BXI2 301 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 CALYQ9NYX4 217 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 SVEP1Q4LDE5 3571 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 SPTAN1Q13813 2472 aaKnown RBP7.22□□□□□ -1.25
SYNE2-217ENST00000555022 RIF1Q5UIP0 2472 aaKnown RBP7.22□□□□□ -1.25
SYNE2-217ENST00000555022 IGHV3OR16-8A0A075B7F1 116 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 DNPH1O43598 174 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 P01737 135 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 HLA-DRB1P01911 266 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 TAS2R45P59539 299 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 PRR20EP86478 221 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 PRR20CP86479 221 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 PRR20DP86480 221 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 PRR20BP86481 221 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 PRR20AP86496 221 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 C10orf113Q5VZT2 155 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 ZBTB34Q8NCN2 500 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 GTSF1Q8WW33 167 aa7.22□□□□□ -1.25
SYNE2-217ENST00000555022 TNRC6AQ8NDV7 1962 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms