RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 HSPB11Q9Y547 144 aa7.85□□□□□ -1.15
SYNE2-215ENST00000554997 IGHV4OR15-8A0A075B7B6 117 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 A0A087WW49 117 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 FXYD6-FXYD2A0A087WZ82 144 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 PPP5D1E7EU14 171 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 M0QZ24 198 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 BMPR1BO00238 502 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 TGOLN2O43493 480 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 SCGB2A1O75556 95 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 OR2C1O95371 312 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 C1QBP02746 253 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 IGLC1P0CG04 106 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 ZP3P21754 424 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 GPR183P32249 361 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 ADMP35318 185 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 RND2P52198 227 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 YPEL3P61236 119 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-215ENST00000554997 ZNF616Q08AN1 781 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-215ENST00000554997 THAP8Q8NA92 274 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 OR1S2Q8NGQ3 325 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 OR5C1Q8NGR4 320 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 ZC4H2Q9NQZ6 224 aa7.84□□□□□ -1.15
SYNE2-215ENST00000554997 IGKV1D-37A0A075B6S9 117 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 IGKV1-17P01599 117 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 OR10J1P30954 320 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 RELQ04864 619 aaPredicted RBP7.83□□□□□ -1.16
SYNE2-215ENST00000554997 FHL3Q13643 280 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 RPEL1Q2QD12 228 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 DEFB136Q30KP8 78 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 FAM106AQ4KMX7 169 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 TEPPQ6URK8 271 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 TREML4Q6UXN2 200 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 LILRB2Q8N423 598 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 HYLS1Q96M11 299 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 TRGV9Q99603 122 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 TMEM147Q9BVK8 224 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 MFFQ9GZY8 342 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 UQCC1Q9NVA1 299 aa7.83□□□□□ -1.16
SYNE2-215ENST00000554997 IGKV1OR2-108A0A075B7D4 117 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 A0A0D9SG52 128 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 SMCO3A2RU48 225 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 RNF222A6NCQ9 220 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 ZFP92A6NM28 416 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 LGALS9O00182 355 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 NDUFA4O00483 81 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 ARPC5O15511 151 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 PFDN1O60925 122 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 DFFBO76075 338 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 FABP1P07148 127 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 RD3LP0DJH9 198 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 HOXD3P31249 432 aaPredicted RBP7.82□□□□□ -1.16
SYNE2-215ENST00000554997 AKR1C1Q04828 323 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 CD300CQ08708 224 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 OR2F1Q13607 317 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 RAB31Q13636 194 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 TIGITQ495A1 244 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 ZNF600Q6ZNG1 722 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 Q8WTZ3 238 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 DUX3Q96PT4 197 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 ATP5SQ99766 215 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 WDR83OSQ9Y284 106 aa7.82□□□□□ -1.16
SYNE2-215ENST00000554997 LSM4Q9Y4Z0 139 aaKnown RBP7.82□□□□□ -1.16
SYNE2-215ENST00000554997 TAAR5O14804 337 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 MPDU1O75352 247 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 CFDP00746 253 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-215ENST00000554997 AP2S1P53680 142 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-215ENST00000554997 SLURP1P55000 103 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 SELENOTP62341 195 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 ZNF345Q14585 488 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 CLINT1Q14677 625 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 BTNL8Q6UX41 500 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 C1QL4Q86Z23 238 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 KCNRGQ8N5I3 272 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 WFDC9Q8NEX5 89 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 DLX4Q92988 240 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-215ENST00000554997 ZNF414Q96IQ9 312 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
SYNE2-215ENST00000554997 ANK2Q01484 3957 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 IGHV3-35A0A0C4DH35 117 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 ZNF320A2RRD8 509 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 K7EMT4 169 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 TOMM40O96008 361 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 IFNA5P01569 189 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 PF4P02776 101 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 PSG1P11464 419 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 CXCL2P19875 107 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 EIF2B2P49770 351 aaKnown RBP7.8□□□□□ -1.16
SYNE2-215ENST00000554997 SYNJ2BPP57105 145 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 ZNF90Q03938 601 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 LGALSLQ3ZCW2 172 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-215ENST00000554997 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 TOMM20LQ6UXN7 152 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 LINC00482Q8N8I6 264 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 PARD6GQ9BYG4 376 aaPredicted RBP7.8□□□□□ -1.16
SYNE2-215ENST00000554997 SMIM3Q9BZL3 60 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 FBXL17Q9UF56 701 aa7.8□□□□□ -1.16
SYNE2-215ENST00000554997 SLC45A2Q9UMX9 530 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms