RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CLEC5A	Q9NY25	188 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	ERGIC3	Q9Y282	383 aa		3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	LSM2	Q9Y333	95 aa	Known RBP	3.67	□□□□□ -1.82
PSMC6-208	ENST00000554956	IGKV1D-8	A0A087WSZ0	117 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	EFCAB10	A6NFE3	127 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956		M0R1X1	148 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	ITGB1BP1	O14713	200 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	RBBP9	O75884	186 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	BRI3	O95415	125 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	HLA-A	P01891	365 aa	Known RBP	3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	UCHL1	P09936	223 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	WNT4	P56705	351 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	HLA-DRB3	P79483	266 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZNF45	Q02386	682 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMEM267	Q0VDI3	215 aa	Predicted RBP	3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	TRIM16L	Q309B1	348 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	RBM48	Q5RL73	367 aa	Known RBP	3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	C10orf55	Q5SWW7	151 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	IDO2	Q6ZQW0	420 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	DEFB125	Q8N687	156 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	TCTEX1D1	Q8N7M0	179 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	ZNF555	Q8NEP9	628 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	BPIFB6	Q8NFQ5	453 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	OR4C5	Q8NGB2	326 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	MAFIP	Q8WZ33	124 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMEM203	Q969S6	136 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	ARHGAP5-AS1	Q96IT6	56 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	LYST	Q99698	3801 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	RNF5	Q99942	180 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMED9	Q9BVK6	235 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	TMEM59	Q9BXS4	323 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	PECR	Q9BY49	303 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	PPDPF	Q9H3Y8	114 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	PLEKHJ1	Q9NW61	149 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	SDHAF2	Q9NX18	166 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	ABRACL	Q9P1F3	81 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	PEF1	Q9UBV8	284 aa	Known RBP	3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956	LRRC42	Q9Y546	428 aa		3.66	□□□□□ -1.82
PSMC6-208	ENST00000554956		A0A1B0GW64	132 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	IRGM	A1A4Y4	181 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	TRDC	B7Z8K6	153 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956		E7EUB6	86 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	CNIH1	O95406	144 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	UBB	P0CG47	229 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	SRM	P19623	302 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZP3	P21754	424 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZBTB25	P24278	435 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	PTBP1	P26599	531 aa	Known RBP eCLIP	3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	FGF9	P31371	208 aa	Predicted RBP	3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	TAS2R43	P59537	309 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	RPS25	P62851	125 aa	Known RBP	3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	DEFB114	Q30KQ6	69 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	GLT8D1	Q68CQ7	371 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	SGPP2	Q8IWX5	399 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	GIMAP1	Q8WWP7	306 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	CACNG8	Q8WXS5	425 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	TSNAX	Q99598	290 aa	Known RBP	3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	C20orf24	Q9BUV8	137 aa		3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.65	□□□□□ -1.83
PSMC6-208	ENST00000554956	TNC	P24821	2201 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	TRBV9	A0A0B4J1U6	114 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956		A0A0G2JLM5	398 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	KLLN	B2CW77	178 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	PPP5D1	E7EU14	171 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956		H0Y980	276 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956		H3BUA1	57 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	MYL12B	O14950	172 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	BET1	O15155	118 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	FABP7	O15540	132 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	IGHV3-23	P01764	117 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	CDK1	P06493	297 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR10A3	P58181	314 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	RHOG	P84095	191 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	PRSS8	Q16651	343 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	HSD17B12	Q53GQ0	312 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	MOB1B	Q7L9L4	216 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	PDPN	Q86YL7	162 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	VKORC1L1	Q8N0U8	176 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956		Q8N402	240 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	VN1R17P	Q8TDU5	208 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	SRSF12	Q8WXF0	261 aa	Known RBP	3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	FAM3D	Q96BQ1	224 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	CMSS1	Q9BQ75	279 aa	Known RBP	3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR2D2	Q9H210	308 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	TUBA4B	Q9H853	241 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	C12orf4	Q9NQ89	552 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	COA4	Q9NYJ1	87 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956		S4R3C0	116 aa		3.64	□□□□□ -1.83
PSMC6-208	ENST00000554956	TRBV6-7	A0A0A0MS04	114 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	IGKV1D-13	A0A0B4J2D9	117 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	TMEM213	A2RRL7	107 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	C2orf70	A6NJV1	201 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR11H12	B2RN74	326 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956		J3QRK9	145 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	MFNG	O00587	321 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	ZNF253	O75346	499 aa		3.63	□□□□□ -1.83
PSMC6-208	ENST00000554956	OR2J3	O76001	311 aa		3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms