RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 NPVFQ9HCQ7 196 aa12.64□□□□□ -0.39
SPTLC2-203ENST00000554901 PPP5D1E7EU14 171 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 HOXD3P31249 432 aaPredicted RBP12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 ADMP35318 185 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 VWC2Q2TAL6 325 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 LILRB2Q8N423 598 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 TMEM217Q8N7C4 229 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 THAP8Q8NA92 274 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 INO80EQ8NBZ0 244 aaPredicted RBP12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 HSPB11Q9Y547 144 aa12.63□□□□□ -0.39
SPTLC2-203ENST00000554901 FXYD6-FXYD2A0A087WZ82 144 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 FABP1P07148 127 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 OR10J1P30954 320 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 YPEL3P61236 119 aaPredicted RBP12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 NHLH2Q02577 135 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 AKR1C1Q04828 323 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 KLF5Q13887 457 aaPredicted RBP12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 FAM106AQ4KMX7 169 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 CHRDL1Q9BU40 450 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 UQCC1Q9NVA1 299 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 HMSDA8MTL9 139 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 NDUFA4O00483 81 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 IGKV1-17P01599 117 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 OR5C1Q8NGR4 320 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 TRGV9Q99603 122 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
SPTLC2-203ENST00000554901 ANK2Q01484 3957 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 SMCO3A2RU48 225 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 ZFP92A6NM28 416 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 LGALS9O00182 355 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 OR2C1O95371 312 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 TSPAN15O95858 294 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 TEPPQ6URK8 271 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 ZNF600Q6ZNG1 722 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 C1QL4Q86Z23 238 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 LINC00482Q8N8I6 264 aa12.61□□□□□ -0.39
SPTLC2-203ENST00000554901 WNK1Q9H4A3 2382 aa12.6□□□□□ -0.39
SPTLC2-203ENST00000554901 DFFBO76075 338 aa12.6□□□□□ -0.39
SPTLC2-203ENST00000554901 SLURP1P55000 103 aa12.6□□□□□ -0.39
SPTLC2-203ENST00000554901 TREML4Q6UXN2 200 aa12.6□□□□□ -0.39
SPTLC2-203ENST00000554901 REC114Q7Z4M0 266 aa12.6□□□□□ -0.39
SPTLC2-203ENST00000554901 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
SPTLC2-203ENST00000554901 IGKV1D-37A0A075B6S9 117 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 IGKV1OR2-108A0A075B7D4 117 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 RNF222A6NCQ9 220 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 MPDU1O75352 247 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 CFDP00746 253 aaPredicted RBP12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 Q8WTZ3 238 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 WDR83OSQ9Y284 106 aa12.59□□□□□ -0.39
SPTLC2-203ENST00000554901 A8MWP6 167 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 ARPC5O15511 151 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 TOMM40O96008 361 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 C1QBP02746 253 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 ELLP55199 621 aaPredicted RBP12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 SELENOTP62341 195 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 OR2F1Q13607 317 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 RAB31Q13636 194 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 ZNF345Q14585 488 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 TIGITQ495A1 244 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 PRR31Q5SQ13 230 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 ATP5SQ99766 215 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 PEMTQ9UBM1 199 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 VWFP04275 2813 aa12.58□□□□□ -0.4
SPTLC2-203ENST00000554901 OVOL1O14753 267 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 RD3LP0DJH9 198 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 CLINT1Q14677 625 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 OR11H4Q8NGC9 324 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 NEURL2Q9BR09 285 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 MFFQ9GZY8 342 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 UFC1Q9Y3C8 167 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 K7EMT4 169 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 AP2S1P53680 142 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 ZNF266Q14584 549 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 OR51G1Q8NGK1 321 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 ZNF414Q96IQ9 312 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 HYLS1Q96M11 299 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 GINS3Q9BRX5 216 aa12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 PARD6GQ9BYG4 376 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 PUS1Q9Y606 427 aaKnown RBP eCLIP12.57□□□□□ -0.4
SPTLC2-203ENST00000554901 IGHV3-35A0A0C4DH35 117 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 UBE2L5PA0A1B0GUS4 154 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 ZNF320A2RRD8 509 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 TAAR5O14804 337 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 IFNA5P01569 189 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 PSG1P11464 419 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 CD33P20138 364 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 CYP2G1PQ6ZSU1 146 aa12.56□□□□□ -0.4
SPTLC2-203ENST00000554901 ELOVL1Q9BW60 279 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms