RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 IGKV1-9A0A0C4DH69 117 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 A0A0D9SG52 128 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 CYB5BO43169 146 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 SSR2P43308 183 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 ATP5G3P48201 142 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 AKIRIN2Q53H80 203 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 TEX36Q5VZQ5 186 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 GOLT1AQ6ZVE7 132 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 RPS19BP1Q86WX3 136 aaKnown RBP1.05□□□□□ -2.24
SCFD1-213ENST00000554776 GNPDA2Q8TDQ7 276 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 ADAT3Q96EY9 351 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-213ENST00000554776 RIC1Q4ADV7 1423 aa1.05□□□□□ -2.24
SCFD1-213ENST00000554776 A0A087X0T9 212 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 OR2T1O43869 369 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 TCL1BO95988 128 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 OR4E1P0C645 316 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 LYNX1P0DP58 116 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 PIGPP57054 158 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 YPEL3P61236 119 aaPredicted RBP1.04□□□□□ -2.24
SCFD1-213ENST00000554776 C10orf55Q5SWW7 151 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 DEFB128Q7Z7B8 93 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 PXT1Q8NFP0 134 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 OR4D11Q8NGI4 311 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 OR13D1Q8NGV5 346 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 STAG3L4Q8TBR4 150 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 SERPINI1Q99574 410 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 ARMC1Q9NVT9 282 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 MED29Q9NX70 200 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 UTP11Q9Y3A2 253 aaKnown RBP1.04□□□□□ -2.24
SCFD1-213ENST00000554776 ANAPC1Q9H1A4 1944 aa1.04□□□□□ -2.24
SCFD1-213ENST00000554776 KIF1BO60333 1816 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 MED12LQ86YW9 2145 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 INTS1Q8N201 2190 aaKnown RBP1.03□□□□□ -2.24
SCFD1-213ENST00000554776 TRAV4A0A0B4J268 109 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 J3QRK9 145 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 CST8O60676 142 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 OR2B3O76000 313 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 COX6A1P12074 109 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 PPP1R2P41236 205 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 PPP1R2P3Q6NXS1 205 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 LINC00311Q8N616 119 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 OR11H6Q8NGC7 330 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 FAM172AQ8WUF8 416 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 C2orf50Q96LR7 162 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 HIST1H2BLQ99880 126 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 TAS2R4Q9NYW5 299 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 MIA2Q96PC5 1412 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 MED1Q15648 1581 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-213ENST00000554776 CAMSAP1Q5T5Y3 1602 aa1.03□□□□□ -2.24
SCFD1-213ENST00000554776 IGKV3D-7A0A0C4DH55 119 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 IGKV3OR2-268A0A0C4DH90 116 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 FUOMA2VDF0 154 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 C2orf70A6NJV1 201 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 F8W036 122 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 RNASE3P12724 160 aaKnown RBP1.02□□□□□ -2.25
SCFD1-213ENST00000554776 BRMS1LQ5PSV4 323 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 LYRM7Q5U5X0 104 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 DEFB119Q8N690 84 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 OR10J5Q8NHC4 309 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 SLAMF6Q96DU3 332 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 CCDC94Q9BW85 323 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-213ENST00000554776 TMEM133Q9H2Q1 129 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 OR5AC2Q9NZP5 309 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 ARL5AQ9Y689 179 aa1.02□□□□□ -2.25
SCFD1-213ENST00000554776 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
SCFD1-213ENST00000554776 ARFGEF3Q5TH69 2177 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 MYH7BA7E2Y1 1941 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 COL4A5P29400 1685 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 SULT1B1O43704 296 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 MRPS14O60783 128 aaKnown RBP1.01□□□□□ -2.25
SCFD1-213ENST00000554776 BANF1O75531 89 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 UBL3O95164 117 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 BRS3P32247 399 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 RNASE4P34096 147 aaKnown RBP1.01□□□□□ -2.25
SCFD1-213ENST00000554776 SRP14P37108 136 aaKnown RBP1.01□□□□□ -2.25
SCFD1-213ENST00000554776 EIF5AP63241 154 aaKnown RBP1.01□□□□□ -2.25
SCFD1-213ENST00000554776 TSNQ15631 228 aaKnown RBP1.01□□□□□ -2.25
SCFD1-213ENST00000554776 DEFB113Q30KQ7 82 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 SPANXN5Q5MJ07 72 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 DHRS4L2Q6PKH6 230 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 SOSTDC1Q6X4U4 206 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 C10orf105Q8TEF2 133 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 PARVBQ9HBI1 364 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 BCL2L10Q9HD36 194 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 SS18L2Q9UHA2 77 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 EPDR1Q9UM22 224 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 SLC35A3Q9Y2D2 325 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 LAMB2P55268 1798 aa1.01□□□□□ -2.25
SCFD1-213ENST00000554776 TRBV19A0A075B6N1 114 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 IGKV2-40A0A087WW87 121 aaPredicted RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 HCRTO43612 131 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 OR1I1O60431 355 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 GADD45GO95257 159 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 IGKV2D-40P01614 121 aaPredicted RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 NCALDP61601 193 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 HSPE1P61604 102 aaKnown RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 ARF6P62330 175 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 DYNLT1P63172 113 aa1□□□□□ -2.25
SCFD1-213ENST00000554776 KRR1Q13601 381 aaKnown RBP1□□□□□ -2.25
SCFD1-213ENST00000554776 ESRGQ1W209 222 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms